| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0232 |
|---|
| Symbol | |
|---|
| ID | 5194707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 271939 |
|---|
| End bp | 273123 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640584677 |
|---|
| Product | fatty acid desaturase |
|---|
| Protein accession | YP_001265590 |
|---|
| Protein GI | 148545488 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1398] Fatty-acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGTATA ACGGCCTGCT CGACCTGTCG GCCTGGCAAC TGGTCGGCAT CACTCTGTTG
ATGACCCACG TGACCATTGT CAGCGTCACG GTCTACCTGC ATCGCTACTC CGCGCACCGG
GCCCTGGAGC TCAACGGCGC GCTCAAGCAC TTCTTCCGCT TCTGGCTGTG GCTGACCACG
GCGCAGAACA CCCGTGAGTG GACCGCCGTC CACCGCAAGC ACCACGCCAA GTGCGAAACC
CCCGACGACC CGCACAGCCC GGTGTACAAG GGCCTGGGCA CGGTGCTGCG CAAAGGTGCC
GAGCTGTACC GTGAAGAGGC ACGCAACCCC GAAACCCTGC GCATCTATGG CAAGAACTGC
CCGGATGACT GGATTGAGCG CAACCTGTAC TCGCGTTACA AACTGGGCGG CATCGCACTG
ATGGCGGTGA TCGATCTGCT GCTGTTCGGC ACCCTGGGCA TCACCATCTG GGCGGTGCAG
ATGATGTGGA TTCCGTTCTG GGCCGCCGGT GTGGTCAACG GCCTGGGCCA TGCCCTGGGC
TATCGCAACT TCGAATGCCG CGACGCCGCC ACCAACCTGG TGCCCTGGGG CATCATCATC
GGCGGTGAAG AACTGCACAA TAACCACCAC ACCTACCCCA ACTCGGCCAA GCTCTCGGTC
AAACGCTGGG AGTTCGACAT GGGCTGGGCG TGGATCCGCT TGTTCTGCCT GTTGCGTCTG
GCCAAGGTGC AGCGCGTGGC GCCCATCGCC CACCGGGTGG CCGGCAAGGC CAGCCTGGAC
ATGGACACCG CCATGGCCAT CCTCAACAAC CGCTTCCAGA TCATGGCCCA GTACCGCAAG
CTGGTGATCG GCCCGCTGGT GAAACAGGAA CTGGCCCGTG TCGACGCCTC GGTGCGTTAC
CGCTTCCGCC GTGCCAAACG GCTGCTCTCG CGCGAAACCA GCCTGCTGGA AGACCGCCAC
CACGTGCGCA TCGAGTCCAT GCTCGCGCAC AGCCAGGCAC TGAAAACCAT CTACGAAAAA
CGCCTGGCCC TGCAGCAGAT CTGGGCGCGC ACCAGTGCCA ACGGCCACGA CATGCTGGCT
GCCATGAAAG ACTGGGTACA CGAGGCCGAA ACCAGCGGCA TCCAGGCACT GCGCGACTTC
GCAGCACAAC TCAAGACTTA CTCGCTGCGT CCGACCGGCG CCTGA
|
|---|
| Protein sequence | MWYNGLLDLS AWQLVGITLL MTHVTIVSVT VYLHRYSAHR ALELNGALKH FFRFWLWLTT
AQNTREWTAV HRKHHAKCET PDDPHSPVYK GLGTVLRKGA ELYREEARNP ETLRIYGKNC
PDDWIERNLY SRYKLGGIAL MAVIDLLLFG TLGITIWAVQ MMWIPFWAAG VVNGLGHALG
YRNFECRDAA TNLVPWGIII GGEELHNNHH TYPNSAKLSV KRWEFDMGWA WIRLFCLLRL
AKVQRVAPIA HRVAGKASLD MDTAMAILNN RFQIMAQYRK LVIGPLVKQE LARVDASVRY
RFRRAKRLLS RETSLLEDRH HVRIESMLAH SQALKTIYEK RLALQQIWAR TSANGHDMLA
AMKDWVHEAE TSGIQALRDF AAQLKTYSLR PTGA
|
|---|
| |