| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0229 |
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| Symbol | |
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| ID | 5195326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 268034 |
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| End bp | 269311 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640584674 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_001265587 |
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| Protein GI | 148545485 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAA CCAACGAATC CTTGATGCAA CGTCGTGTAG CTGCCGTCCC ACGTGGCGTC
GGCCAGATCC ACCCGATCTT CGTCGACACC GCGAAGAACT CGACCGTGAT CGACGTTGAA
GGCCGCGAAC TGATCGACTT CGCCGGCGGC ATCGCAGTAC TGAACACCGG CCACCTGCAC
CCGAAAGTGG TTGCAGCCGT GCAAGAGCAG CTGACCAAGG TCAGCCACAC CTGCTTCCAG
GTGCTGGCTT ACGAGCCCTA CGTAGAGCTG TGCGAAAAGA TCAACAAGCT GGTCCCAGGC
GACTTCGACA AGAAGACCCT GCTGGTCACC ACCGGCTCCG AAGCCGTTGA AAACGCCGTC
AAGATCGCCC GTGCTGCCAC TGGCCGCGCT GGCGTCATCG CCTTCACCGG CGGTTATCAC
GGCCGTACCA TGATGACCCT GGGCCTGACC GGCAAGGTCG TGCCGTACTC CGCTGGCATG
GGCCTGATGC CAGGCGGCAT CTTCCGCGCC CTGTTCCCGA GCGAACTGCA CGGTATCAGC
GTTGACGACG CCATCGCCTC GGTCGAGCGC ATCTTCAAGA ACGACGCCGA GCCGCGCGAC
ATCGCCGCGA TCATCCTCGA GCCAGTACAA GGCGAAGGCG GCTTCCTGCC AGCGCCGAAA
GAGCTGATGA AACGCCTGCG CGCCCTGTGC GACCAGCACG GCATCCTGCT GATCGCCGAC
GAAGTACAAA CTGGCGCTGG CCGTACCGGC ACCTTCTTCG CCATGGAACA GATGGGCGTT
GCGCCTGACC TGACCACCTT CGCCAAATCC ATCGCTGGCG GCTTCCCGCT GGCCGGTGTG
TGCGGCAAGG CCGAATACAT GGACGCCATC GCGCCTGGCG GCCTGGGCGG TACCTACGCG
GGTTCGCCGA TCGCTTGCGC CGCAGCCCTG GCCGTGATCG AAGTGTTCGA AGAAGAAAAA
CTGCTGGACC GCAGCAAGGC TGTGGGTGAG CGCCTGACCG CCGGCCTGCG CGAAATCCAG
AAGAAGTACC CGATCATCGG CGACGTCCGT GGTCTGGGCT CGATGATTGC CGTCGAAGTC
TTCGAGAAAG GCACTCACAC CCCGAACGCA GCTGCTGTTG GCCAGGTTGT CGCCAAGGCT
CGTGAAAAGG GTCTGATCCT GCTGTCTTGC GGCACCTACG GCAACGTCCT GCGTATCCTG
GTTCCGCTGA CCGCCGAAGA CGCGCTGCTG GACAAAGGCC TGGCCATCAT CGAAGAGTGC
TTCGCTGAAA TCGCCTGA
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| Protein sequence | MSKTNESLMQ RRVAAVPRGV GQIHPIFVDT AKNSTVIDVE GRELIDFAGG IAVLNTGHLH
PKVVAAVQEQ LTKVSHTCFQ VLAYEPYVEL CEKINKLVPG DFDKKTLLVT TGSEAVENAV
KIARAATGRA GVIAFTGGYH GRTMMTLGLT GKVVPYSAGM GLMPGGIFRA LFPSELHGIS
VDDAIASVER IFKNDAEPRD IAAIILEPVQ GEGGFLPAPK ELMKRLRALC DQHGILLIAD
EVQTGAGRTG TFFAMEQMGV APDLTTFAKS IAGGFPLAGV CGKAEYMDAI APGGLGGTYA
GSPIACAAAL AVIEVFEEEK LLDRSKAVGE RLTAGLREIQ KKYPIIGDVR GLGSMIAVEV
FEKGTHTPNA AAVGQVVAKA REKGLILLSC GTYGNVLRIL VPLTAEDALL DKGLAIIEEC
FAEIA
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