| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0226 |
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| Symbol | |
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| ID | 5194837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 263971 |
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| End bp | 265728 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640584671 |
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| Product | hypothetical protein |
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| Protein accession | YP_001265585 |
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| Protein GI | 148545483 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01887] dipeptidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.767872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGGCA AAGGAATGCG CACAACCATG CAGTTGAAAA AACTCACCGC CACCACCCTG
CTGCTGGCCG GCATTGGCCT GTTCACCCAG CCTGCCCAAG CCAACCTCAC CCAGCAGCAG
TCCGCAGCTA TCGTCAAAGC CTTCGACGGC AGCGACCCAA GCGATTTCAG GCAATTCCTC
GGCAAGCTCA AAGGCAGCGC CCTGGGCAAG GCCGACAACC TCGAGGCAAC CGTCGACGCC
TACCTGGCCA ACAAGCCATT GGCCGCCGAG CAACAAGACG AGATCAACCG CCTGCTCGGC
CTGTATACCC GCATCAAGTA TGGCAAAGCC GCTACCGAAA CCCTGCGTGA ACTGGTAGCC
ATCCCCACCT TCAACGTCGA GGGTACACCG CAGTACGAAA ACCCTGAATT CCTCAAGATC
GCCGACAAGA TCAAGGCCTT GGCCGACCGC TTCGGCCTGG CCTTCCGCAA CATCGACAAC
CGGGTGTACG AGATCTCGCT GGGCAGCGGG AAGGAAGTGA TCGGTATCCA TGCCCACGCT
GACGTCGTGC CGGTCAACCC GGACAACTGG AAGCTGGCCG ACGGTACGCG CCTGGACCCG
TTCAAGGTCA CCCTGGTGGG TGACCGCATG TACGGCCGCG GCACCGAAGA CGACAAGAAC
GGCATCGTGG TGGCGATGTA TGCGCTGAAA GTGGCCAAGG ACGAAAACCT GCCGCTCGCC
CGGCAGTTCA AGCTGCTGAT CGACACCACC GAAGAAACCA GCGGTGATGC CATCCCCTAC
TACTTTGAGC GCAACCCTAC GCCCGATTAC AACCTGGCCC TCGACGGCGG CTACCCCGTA
GTGATTGCCG AGAAAGGCTA CGGCACGGTC ATGGCCAGCT TCACCAAGCG CCCGGCCAGC
GGCAAGGGTG CCGAGATCGT CAACCTGACC GGTGGCCTGG CCACCAACCA GATCCCGACA
ACTTCGGTTG CGACCCTGAT TTCTGACAAC CCGGCACAGC TGGTCAAGCA CCTGCAGCAA
GCCGGTGCCA GATATGTGAA GCAGCATGGA AGCGACTTCA GCATCGACGC CAAGGCCGAC
GGCAAGCAAG TCTTGCTCAC CGTGACCGGT GTTTCCGCAC ACTCTTCGGA GCCGGAATCC
GGCATCAACC CGGTGGCGCG TATGCTCGAC TTCATCAATG GCCTCGGCCA GCAGGTGTCG
CTCAAGCACA ACCACTTTAC CGACGCGGCC CGCTACGCCG CCGAAAACTG GGGCCTGGAC
TACCTGGGCA ACACGCTCGG CGTGGCCTTC AAGGACCCGT TCATGGGCCC GCTGACCACC
TCGCTGACCT TTGTCGGGGT GGATGACAAA GGCTTGAAAC TGGCGGTGAA TCTGCGCATT
CCCAAGGGGA AGCCGATCGC CACGATCAAG GACGAGCTGG CCGACAAACT GGGTAAATGG
ACCCGGCAAA GCAACACCTC GGTGGCGTTC GATTACAGCC TGGACGAGCC GATGTACCGC
AACCCTGAAG GCGAATGGGT AAAGGCCCTG CTCGCTGTGG CCACCGAGAA CCTGGGGATG
AAGCATGAGT TCGGCACGTC CGCCGGTGCG ACTTCGGTCC ACGACCTGCC CAACGGCGTC
CAGTTCGGCC TGGCCATGCC GGACGTGAAG TACACCGGGC ACAACGACAA CGAGTTCAAG
ACCGTGGAGC AGTTCATGCT GGACTTGCAG GTGGTGAGCG AAATGGTGGC GCGGATCGGG
CAGATGCCGA AGCTTTGA
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| Protein sequence | MIGKGMRTTM QLKKLTATTL LLAGIGLFTQ PAQANLTQQQ SAAIVKAFDG SDPSDFRQFL
GKLKGSALGK ADNLEATVDA YLANKPLAAE QQDEINRLLG LYTRIKYGKA ATETLRELVA
IPTFNVEGTP QYENPEFLKI ADKIKALADR FGLAFRNIDN RVYEISLGSG KEVIGIHAHA
DVVPVNPDNW KLADGTRLDP FKVTLVGDRM YGRGTEDDKN GIVVAMYALK VAKDENLPLA
RQFKLLIDTT EETSGDAIPY YFERNPTPDY NLALDGGYPV VIAEKGYGTV MASFTKRPAS
GKGAEIVNLT GGLATNQIPT TSVATLISDN PAQLVKHLQQ AGARYVKQHG SDFSIDAKAD
GKQVLLTVTG VSAHSSEPES GINPVARMLD FINGLGQQVS LKHNHFTDAA RYAAENWGLD
YLGNTLGVAF KDPFMGPLTT SLTFVGVDDK GLKLAVNLRI PKGKPIATIK DELADKLGKW
TRQSNTSVAF DYSLDEPMYR NPEGEWVKAL LAVATENLGM KHEFGTSAGA TSVHDLPNGV
QFGLAMPDVK YTGHNDNEFK TVEQFMLDLQ VVSEMVARIG QMPKL
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