Gene Pput_0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0225 
Symbol 
ID5193050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp263363 
End bp263800 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content59% 
IMG OID640584670 
ProductCBS domain-containing protein 
Protein accessionYP_001265584 
Protein GI148545482 
COG category[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.791993 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCG TCGAACAAAT CCTCAAGACC AAGTCCCAGC ACCAGACCGT GTACACCATC 
GGCCCGGATG ACTCGGTGCT CGACGCCCTG AAACTGCTGG CGGAGAAAAA CATCGGTGCA
CTGCCCGTGG TCGAGGGTGG CCAGGTAGTG GGCATCGTCA GTGAGCGGGA CTACGCGCGC
AAACTGGTCC TCAAGGGCCG CTCTTCCGCC GCTACGCCGG TACGCGAAAT CATGAGCGCA
CCGGTAGTCA CTGTGGATCC CAAGCAAAAG CTCGATTTCT GCATGAACCT GATGACCGAC
CGGCACCTGC GTCACCTGCC GGTGGTCGAC AACGGCAGAT TGCTCGGCCT TCTGTCGATC
GGCGACCTGG TCAAGGAAAC CATTGACGAA CAGGCGAGCC TGATCAAGCA AATGGAGCAG
TACATCCGCG GCGAATGA
 
Protein sequence
MKTVEQILKT KSQHQTVYTI GPDDSVLDAL KLLAEKNIGA LPVVEGGQVV GIVSERDYAR 
KLVLKGRSSA ATPVREIMSA PVVTVDPKQK LDFCMNLMTD RHLRHLPVVD NGRLLGLLSI
GDLVKETIDE QASLIKQMEQ YIRGE