Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0222 |
Symbol | |
ID | 5194953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 261886 |
End bp | 262344 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640584667 |
Product | YbaK/prolyl-tRNA synthetase associated region |
Protein accession | YP_001265581 |
Protein GI | 148545479 |
COG category | [S] Function unknown |
COG ID | [COG2606] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.838167 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATGG CAAAGACCCT GCAGGCCCGC CTGGACAAGG CCAACTGCGA CTACGACATC ATTCCCCACC CACATTCGGC CACCAGCCTG GAGTCGGCCC GAACGGCCGG CGTGCCCGCC GAGCGGGTCG CCAAGTCGGT GATGCTCGAT GACCGTCATG GCAACTACAT CATGGCCGTG CTACCGGCCA ACCGGCACCT GGACATGACC AAGGTGCGCA TGTCCGGGGC CTGGCATCTG ACCCGTGAAA GCGGTCTGCC GAGCCTGTTC AATGACTGCG AACGCGGAGC CGTGCCGGCC CTTGGCGATG CTTACCAGAT AAAAATGCTG CTCGACCCGA GTCTTACCCG CCAAGGCGAT GTCTACCTGG AGGCGGGTGA CCACGATCAC CTGATTCACA TGAGCATGGA GCAGTACATG AAACTGGTGC CGCACGCCGA AGTGCGCGAG CTGTGCTGA
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Protein sequence | MRMAKTLQAR LDKANCDYDI IPHPHSATSL ESARTAGVPA ERVAKSVMLD DRHGNYIMAV LPANRHLDMT KVRMSGAWHL TRESGLPSLF NDCERGAVPA LGDAYQIKML LDPSLTRQGD VYLEAGDHDH LIHMSMEQYM KLVPHAEVRE LC
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