| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0214 |
|---|
| Symbol | |
|---|
| ID | 5194773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 253961 |
|---|
| End bp | 254599 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640584659 |
|---|
| Product | peptidylprolyl isomerase, FKBP-type |
|---|
| Protein accession | YP_001265573 |
|---|
| Protein GI | 148545471 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.599977 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.78571 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCTCGAT ATCTTGTTTT AGGCTTATGC CTGATGGCAC CCCTCGCCTT GGCCGACAAC
GACGACCACG ATTTGGCCTA CAGCCTGGGT GCCAGCCTGG GTGAGCGCCT GCGCCAGGAG
ATGCCGGGCT TGCAACTGGA CGCACTGGTC GAAGGCCTGA AGCAGTCCTA TCAGGGGCAA
CCCCTGAAAC TCGACAAGGC ACGCATGCAG GCGGTGCTGC AGCAGCATGA AACCCAGGAA
GGCGACGCCG CTGTGCAAAA GCTGCAGGCC GCCGAAACGC GTTTCATGGC GAATGAACGT
GGGCGTTATG GGGTGCACGA ACTAACGGAA GGTGTGCTGT ACAGCGAATT GCAACCAGGC
ACGGGTGTAC AGCCGAAAGC GGGCGGCAAA GTGCAGGTGC GTTATGTGGG CAGATTGCCG
GATGGCTCAA TATTCGACCA AAACCAGACC CCCCAATGGT TCAACCTGGA TTCGGTTATC
GAAGGGTGGC AGGTCGCCTT GCCGAAAATG CACACCGGCG CCAAATGGCG CTTGGTAATT
CCTTCAGCGC AAGCCTATGG CGCCGAGGGG GCGGGAGACC TGATTGCACC CTACACCCCC
TTGGTATTCG AGATCGAACT GCTGGCGGTT GGCGACTGA
|
|---|
| Protein sequence | MPRYLVLGLC LMAPLALADN DDHDLAYSLG ASLGERLRQE MPGLQLDALV EGLKQSYQGQ
PLKLDKARMQ AVLQQHETQE GDAAVQKLQA AETRFMANER GRYGVHELTE GVLYSELQPG
TGVQPKAGGK VQVRYVGRLP DGSIFDQNQT PQWFNLDSVI EGWQVALPKM HTGAKWRLVI
PSAQAYGAEG AGDLIAPYTP LVFEIELLAV GD
|
|---|
| |