| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0210 |
|---|
| Symbol | |
|---|
| ID | 5193016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 250186 |
|---|
| End bp | 251286 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640584655 |
|---|
| Product | protein of unknown function DUF513, hemX |
|---|
| Protein accession | YP_001265569 |
|---|
| Protein GI | 148545467 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2959] Uncharacterized enzyme of heme biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.582748 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAGA CTGTCTTGTC CAATAACGAT CAACCGTCGG CACAGGCGCC TGCGGAACCC
GTTACCACCC CACCTGCCAA GCGCTCCGGC AGTGGCCTGG CAGCGCTGGC CTTGCTGCTG
GGTGCGGCCG GGGTGGCGGT AGGTGGCTGG GGTGTCTGGC AGGTGCGTCA ACTGCAGGGC
AGTGAGTTCA ACCAGGGCCA GCACATCGAG GCGCTGACCC AGCGCGCCGA GGCGCTGCAG
CAACGTGAAC AGCAGATCAG TGCGCAACTG GCCAGTCTGC CAGCCGCCAG CGAGCTGGAA
GACCGCCGGC GGCTGGTAGC CCAACTGCAG GGCGACCAGC AGCGGCTCAG TCAGCGCCTG
GAAACCGTGC TGGGAGAAAG CCGCAAAGAG TGGCGCCTGG CCGAAGCCGA GCACCTCCTG
CGCTTGGCTA CCCTGCGCCT TTCCGCATTG CAGGACATCA CCAGTGCCAA AGCCCTGGTC
GAAGGCGCCG ACGAGATCCT GCGCGAGCAG AGCGACCCGG GTGCCTTCGC CGCCCGCGAG
CAGCTGGCCC GCAGCCTGGC CACGCTCAAC AGCACTCAGC AACCGGACCG CACTGGCCTG
TTCTTGAAGC TGGCTGCGCA GCGTGAGCTG GTACAGCAGT TGAGCGCCCA GTCCCCCGAG
TTCGACAGTA ACGCCGATGC GCTTGGCGCC CTGACCGCCG ACGGTGATGG TGCCAGCAGG
CTGTCGCAGT GGTGGGCAGA AATATCCAAG TACTTCCAGA TCGACTTCAA TGCCGATGAA
AACGTGCGTC CGTTGCTGGC CGGGCAGCAA CTGAACCAGC TGCGCCTGGC GCTGAGCCTG
ACTATCGAGC AGGCCCAGTG GGCGGCGCTC AATGGTGATG CCAAGGTTTA CACGCAGGCG
CTGGACGACG CCCGCAGCGT ACTGCTGGCC AACTTCAACG CAGACAACCC GCAAAGCAAG
GCCATGCTCG ACAGCCTCAA TGCCCTGGCC GATCAGCCGG TATCGGTGGT TACCCCTGAC
CTTAGTGAAA GCCTGGCGGC AGTGCAGGCC TATATTCAGC GCCGTCACCT GCCGGCCGAG
GCTGAAGGGG GCAAGCCATG A
|
|---|
| Protein sequence | MSETVLSNND QPSAQAPAEP VTTPPAKRSG SGLAALALLL GAAGVAVGGW GVWQVRQLQG
SEFNQGQHIE ALTQRAEALQ QREQQISAQL ASLPAASELE DRRRLVAQLQ GDQQRLSQRL
ETVLGESRKE WRLAEAEHLL RLATLRLSAL QDITSAKALV EGADEILREQ SDPGAFAARE
QLARSLATLN STQQPDRTGL FLKLAAQREL VQQLSAQSPE FDSNADALGA LTADGDGASR
LSQWWAEISK YFQIDFNADE NVRPLLAGQQ LNQLRLALSL TIEQAQWAAL NGDAKVYTQA
LDDARSVLLA NFNADNPQSK AMLDSLNALA DQPVSVVTPD LSESLAAVQA YIQRRHLPAE
AEGGKP
|
|---|
| |