| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0200 |
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| Symbol | |
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| ID | 5192743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 239788 |
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| End bp | 241206 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640584645 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001265559 |
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| Protein GI | 148545457 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.844152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGC TGATCCTGGC TGGCCTGTGC CTGTCGCTGG GGGCCTGCAT GATGGTGGGC
CCCGACTATG AGGTGCCTGG GGATGCGGCC GTGCAACGCA ATGACCTGAA CGGCCCGCTG
CGCCAGGATG CCGACAGCGT CGTGTCGGCG CCGGTCCCCG AGGACTGGTG GCAGCTGTAT
CAGGATCAGC GGCTGAATGA ACTGGTGCGC CAGGCGCTGA GTGCCAACAC CGAATTGCGC
GTGGCGGCGG CCAACATCGC CAAAGCTCGC GCCCAGGTGG AGGTGGCTGA ATCGCAAGGC
GGCTTCAACG GTGGCGTCAA ACTCGGCGCT CAGCGGCTGC AGGAGTCGGG CGAAGCTTTC
CTGCAGCCTG AGAAGGTGCC GGTAGCCAAC ATCGGTGAGG CCATCATCAG TGCCTCGTAC
CAGTTCGACC TGTGGGGTAC CTTCAAGCGT GGTACCGAGG CTGCCAAGGC AAATGCCGAC
GCAGTGCAGG CCGCTGCCGA CACTGCCCGC ATCACGCTTG TGGCGGACGT GGTCAAGGCT
TATACCCAGG TGTGCTCGGC CAACGAGGAA TACCACATTG CCCGTGAGTC CCTCGATCTG
CAGGAGCAAA GCGTGAAACT CAACCAGCGC CTGCGCGATG CTGGGCGTGG TGATGAAACC
CAGGTCACCC GCTCGCAGAC CCAGTTCAAA TCCTTGCGTG CCGAACTGCC ACGCTTCAAG
GCCGAACGCG AGACGGGCAT GTACACCCTG GCCGCGCTGC TGGCCAAGCC GGTCGACCAG
TTGCCTGCCG GTACCGCCGA TTGCGCCGAG CTGCCGCACC TGAACCAGCT GGTCCCGGTG
GGCGATGGTG CGGCCCTGCT CAAGCGCCGC CCCGACGTGC GTCAGGCCGA ACGCCAGCTG
GCTGCCGCCA CCGCCTATAT TGGCGTGGCC ACCGGCGCCT TGTACCCGGA CATCAGCATT
GGCGCCCAGG TTGGCACCAT CGGTATCCTG GAGAACCTTG GTGAGCCTTC GACCAACCGC
TGGGGTTTTG GCCCGCAGAT CAGCTGGACC ATCCCCACCA ACGGCACCCG TGCCCGCATT
CGCATGGCCG AAGCCTCGAC CCAGGCGGCC CTGGCGAACT TCGATGGGGT TGTGCTGAAT
GCCATCCGCG AGACCCAGAC CCGCCTGGCG CAATACAGCG CCTTGCTCGA TCGGCGCGAG
GCGCTGGCCG AGGCGGAGAA ATCGGCCAAG GAAGCGGCGG ACCAGACGCA CCGGTATTAC
CAAGCGGGGC GTGAGTCGTT CCTGGCGGAT TTGCAGGCGA CGCGGACCTA TACCGATATG
CGTGCGCAGT TGGCGGCGGC GAACAGCCAA GTGGCGTTGG GGCAGATTGG GGTGTTTCTC
GCGTTGGGTG GGGGGTGGAA GGCCCGTACT CAGGAATAA
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| Protein sequence | MKQLILAGLC LSLGACMMVG PDYEVPGDAA VQRNDLNGPL RQDADSVVSA PVPEDWWQLY
QDQRLNELVR QALSANTELR VAAANIAKAR AQVEVAESQG GFNGGVKLGA QRLQESGEAF
LQPEKVPVAN IGEAIISASY QFDLWGTFKR GTEAAKANAD AVQAAADTAR ITLVADVVKA
YTQVCSANEE YHIARESLDL QEQSVKLNQR LRDAGRGDET QVTRSQTQFK SLRAELPRFK
AERETGMYTL AALLAKPVDQ LPAGTADCAE LPHLNQLVPV GDGAALLKRR PDVRQAERQL
AAATAYIGVA TGALYPDISI GAQVGTIGIL ENLGEPSTNR WGFGPQISWT IPTNGTRARI
RMAEASTQAA LANFDGVVLN AIRETQTRLA QYSALLDRRE ALAEAEKSAK EAADQTHRYY
QAGRESFLAD LQATRTYTDM RAQLAAANSQ VALGQIGVFL ALGGGWKART QE
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