| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0199 |
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| Symbol | |
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| ID | 5192742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 238916 |
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| End bp | 239791 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640584644 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001265558 |
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| Protein GI | 148545456 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.232672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC CTATGCTGAC CTTGGGCCGT GTGGTCCTGA CCTTGCTGGT AGTGACCTTC
GCCGCCGTGC TCGTGTGGCA GATGGTGGTC TACTACATGT TTGCCCCCTG GACCCGTGAC
GGCCACATAC GCGCTGACGT GATCCAGATC GCCCCCGATG TGTCGGGATT GATCCAGAAG
GTCGAGGTGC GCGACAACCA GACCGTCAAA CGTGGCGACG TGCTGTTCAC CATCGACCAG
GACCGCTTCA CCTTGGCCCT GCGTCAAGCC AAGGCAACCC TTGGCGAGCG CCAGGAGACC
CTGGCCCAGG CTTCCCGCGA AGCGCAGCGC AACCGCAAGC TGGGCAACCT GGTGGCCGCC
GAGCAACTGG AAGAAAGCCA GTCCCGCGAG GCCCGTGCCC GTTCGGCTGT CAGCGAGGCG
CAAGTGGCTG TCGATACTGC TCAGCTCAAC CTTGACCGCT CGGTGGTGCG CAGCCCGGTA
GACGGCTACC TCAACGACCG CGCGCCGCGT AACCACGAGT TCGTCACCGC CGGCCGCCCG
GTGCTGTCGG TGGTCGATAG CGCCTCGTAC CATGTCGATG GCTACTTCGA GGAAACCAAG
CTTGGCGGTA TACACATCGG CGATGCCGTG GACATCCGTG TGATGGGCGA CAACACCCGC
CTGCGCGGCC ATGTGCAGAG CTTTGCCGCT GGCATCGAAG ACCGCGACCG CAGCAGTGGC
GCCAACCTGC TGCCTAACGT TAACCCGGCG TTCAGTTGGG TACGCCTGGC CCAGCGCATC
CCGGTGCGCA TCGCCTTTGA CGAAGTGCCG CAAGACTTCC GCATGATCGC CGGGCGCACT
GCCACGGTGT CGATCATCGA GGGCCAGCGC CCATGA
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| Protein sequence | MKKPMLTLGR VVLTLLVVTF AAVLVWQMVV YYMFAPWTRD GHIRADVIQI APDVSGLIQK
VEVRDNQTVK RGDVLFTIDQ DRFTLALRQA KATLGERQET LAQASREAQR NRKLGNLVAA
EQLEESQSRE ARARSAVSEA QVAVDTAQLN LDRSVVRSPV DGYLNDRAPR NHEFVTAGRP
VLSVVDSASY HVDGYFEETK LGGIHIGDAV DIRVMGDNTR LRGHVQSFAA GIEDRDRSSG
ANLLPNVNPA FSWVRLAQRI PVRIAFDEVP QDFRMIAGRT ATVSIIEGQR P
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