Gene Pput_0192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0192 
Symbol 
ID5191116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp232545 
End bp233408 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content62% 
IMG OID640584637 
ProductABC transporter related 
Protein accessionYP_001265551 
Protein GI148545449 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC CATTGCCAGG CCACACGGCC AGCAACCTGA GCCGTGTTGC AGCGCCGCCT 
TTGCTCAAGG TGGATAACCT CAGCCTCGAA TACCGTACCG CGCAACGCGT GGTGCGGGCC
ACCCATCAGG TCAGCTTCGA AGTCGACCGC ACTGATCGTT TTGTACTGCT CGGCCCCTCC
GGCTGTGGCA AGTCCACCCT GCTCAAAGCC GTGGCCGGTT TTATCCAGCC GCAAGAAGGC
CAGATTCTGC TGCAGGGCCA GACAGTTCGT GGCCCAGGCC CCGACCGCAT CGTGGTGTTC
CAGGAGTTTG ACCAGTTGCC GCCGTGGAAA ACGGTGAAGC AGAACGTCAT CTTTCCGCTG
CTGGTGTCTG GCCAACTCAA GCGTGCGGAG GCGGAGGAGC GGGCGCTGCA TTATCTGGAG
AAGGTCGGTC TGGCCGCCTT TGCCGATGCT TATCCACACA CGTTGTCCGG TGGTATGAAG
GCACGTGTGG CAATTGCCCG GGCCTTGGCC ACCCAGCCCA AGATCCTGTT GATGGATGAG
CCGTTCGCCG CCCTGGATGC GCTGACCCGG CGCAAGATGC AGGAAGAGCT GTTGCTGCTG
TGGGAGGAAG TGCGGTTCAC CCTGTTGTTC GTCACCCACT CCATCGAAGA AGCGCTGGTG
GTCGGCAACC GCATCCTGTT GTTGTCGCCC CACCCGGGGC GGGTGCGCGC CGAAGTGCAC
AGCCATCAAT ACGGCCTGGG CAGCCTGGGT GGCAGCGACT TCCAGGCCAG TGCCCGGCGT
ATCCACCGTT TGCTGTTCGA TGAAGCCGAT ATCCCGGAAC AGCCTGACAA CCTTGGGTTC
AACGATATTC GTATCGCCTA CTGA
 
Protein sequence
MTAPLPGHTA SNLSRVAAPP LLKVDNLSLE YRTAQRVVRA THQVSFEVDR TDRFVLLGPS 
GCGKSTLLKA VAGFIQPQEG QILLQGQTVR GPGPDRIVVF QEFDQLPPWK TVKQNVIFPL
LVSGQLKRAE AEERALHYLE KVGLAAFADA YPHTLSGGMK ARVAIARALA TQPKILLMDE
PFAALDALTR RKMQEELLLL WEEVRFTLLF VTHSIEEALV VGNRILLLSP HPGRVRAEVH
SHQYGLGSLG GSDFQASARR IHRLLFDEAD IPEQPDNLGF NDIRIAY