| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0186 |
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| Symbol | |
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| ID | 5191608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 199668 |
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| End bp | 201824 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640584631 |
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| Product | ABC transporter related |
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| Protein accession | YP_001265545 |
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| Protein GI | 148545443 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0846231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAATCCG AAGTCAGTCG AGTCCAACTC AGCCACGATC CACGCAGTCA GCATGACGAT
CCCCTGCTGG ATAGTCTGCT GAGCCTGTGT GTCCTGCACC AGAAGCCCGC CAGCCGGGTC
ATGCTGACAA CAGGCCTACC GCTACCCGCC CAGCGCCTGA GCCCTGAACT GCTGCCCCGC
GCTGCAGCCC GGGCAGGCCT GCAGGGGCGC CTGCTTCAGC GAAAGCTGGA GCAGATCCCA
AGTATCGCCA TGCCGGCCAT GCTGCTGCTC AAGGAGGGCC GCAGCGCCGT CCTGCTCGGC
TGGGAGAACG ATGACACCGC GCGCCTGCTA CTCAGCGAGA GCGACGGTGG CGAGGTGCAC
GTCAGCCGCG AAGCACTGCT AAGCGACTAC AGCGGCCGCG TGTTCTTCGC GCAGCCGCAG
CACAAGTTCG ATGTCAACCA CGGCAACCTC ATCCCCCGCG CGAAGTCGTG GTTCCGCGAC
ACCCTGCTGC GCAGCAAGTG GTTGTATATC GACGCTATCG CCGCCAGCCT GGTGATCAAC
CTGATCGCCT TGGCCGCGCC GCTGTTCGTG ATGAACGTGT ATGACCGGGT GGTGCCAAAC
CAGGCCACCT CGACGCTCTG GGTACTGGCC ATCGGTATCG CCGGCGCGTA CATCTTCGAC
CTGATCCTCA AAGGCCTTCG CGGCCTGTGC CTGGACCTGG CAGGCAAGAA GACCGACCTG
ATCATCTCGG CAACGCTGTT TGAACGTATC GTCGGCATGT CGATGAAGTA CCGGCCGGCG
CGGGTCGGCA GCTTTGCCCA GAACATTCAC GAGTTCCAAG GCCTGCGCGA CTTCCTCGCC
TCGCTGACCC TGACCAGCCT GATCGACCTG CCCTTTACCA TCCTGATTTT GATCGTCATC
GCCATCATTG GCGGGCACCT GGTGTGGATA CCGATCATCG CTTTCCCGCT GGCTCTGGGC
ATCGGCTACG CCCTGCAGCG GCCACTGATG GCGACCATGG AGCGGACCAT GGCTTTGGCA
TCAGAGCGCC AGTCCAGCCT GATCGAAACC CTGGCGGGTC TGGATGCGGT AAAGGTCAAC
AACGCCGAAA GCGAACGCCA GTATATGTGG GAGCAAACCC TCGGCACCCT GAGCCGGCTG
GAACTGCGCG TGAAAGTGCT GTCGAGCCTG GCGATGAACA TCACCCTGCT GATCCAGCAA
CTGGCAGGCG TGGCAATGAT CTGCGTCGGC GTGTACCTGA TCATCGACGG CAACCTGAGC
ATGGGCGGCC TGGTGGCTTG CTACATGCTC AGCGGCCGCG CCCTCGGCCC GTTGGGCCAA
CTCAACGGCC TGCTCGCCCG CTACCAGCAA GCCAAGGTGA CCATGGTCTC CACCGACCAC
ATGATGGATC TACCCCAAGA GCGCAACTTC GAAGAGCGCC CGCTGAGCCG CAAGGTGCTG
CAGGGCAGCG TCGAGTTCCG CGGTGTCGAC TTCACTTATC CGAACCAGCA GAACCTGGCC
CTGAAGAATA TCAACCTGAC CATCCGCCCT GGCGAGAAGG TCGGCATCAT CGGTCGCAGC
GGCTCGGGCA AGAGCTCGCT GGCCAAGCTC ATTGTCGGCC TGTACGAGGC CGATGGTGGC
TCGCTGCTGG TCGATGGCGT CGACATTCGC CAGATCGATG TCAGCGAACT GCGCCACAAC
ATCGGCTACG TCCCACAGGA CATCCAGCTG CTGGCCGGCA CCTTGCGTGA CAACCTGGTC
AGCGGCGCCC GCTACATCGA GGACGAATTG ATCCTGCAGG CCGCTGAACT GGCGGGCGTA
CATGAATTCG CCCGGCTGCA CCCCGACGGC TACGAGCTGC AAGTGGGTGA ACGCGGGCAG
AACCTGTCCG GCGGCCAGCG GCAGAACGTC GCCTTGGGCC GTGCGCTGCT TCTCAACCCG
CAGATCCTGC TGCTGGACGA GCCGACCAGC GCCATGGACA ACACCGGTGA AGAACGCCTC
AAGCAGCGCC TGCAGGCGGT GGTGGAGGGC AAGACGGTAC TGCTGGTCAC GCACCGTGCC
TCGTTGCTGT CACTGGTAGA CCGGCTGATC GTGATCGATC GCGGGCAGAT TGTCGCCGAC
GGCCCGAAAG CCGCGGTCAT GGATGCACTG AAGAAGGGGC AGATCAGTGT TGCATAA
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| Protein sequence | MESEVSRVQL SHDPRSQHDD PLLDSLLSLC VLHQKPASRV MLTTGLPLPA QRLSPELLPR
AAARAGLQGR LLQRKLEQIP SIAMPAMLLL KEGRSAVLLG WENDDTARLL LSESDGGEVH
VSREALLSDY SGRVFFAQPQ HKFDVNHGNL IPRAKSWFRD TLLRSKWLYI DAIAASLVIN
LIALAAPLFV MNVYDRVVPN QATSTLWVLA IGIAGAYIFD LILKGLRGLC LDLAGKKTDL
IISATLFERI VGMSMKYRPA RVGSFAQNIH EFQGLRDFLA SLTLTSLIDL PFTILILIVI
AIIGGHLVWI PIIAFPLALG IGYALQRPLM ATMERTMALA SERQSSLIET LAGLDAVKVN
NAESERQYMW EQTLGTLSRL ELRVKVLSSL AMNITLLIQQ LAGVAMICVG VYLIIDGNLS
MGGLVACYML SGRALGPLGQ LNGLLARYQQ AKVTMVSTDH MMDLPQERNF EERPLSRKVL
QGSVEFRGVD FTYPNQQNLA LKNINLTIRP GEKVGIIGRS GSGKSSLAKL IVGLYEADGG
SLLVDGVDIR QIDVSELRHN IGYVPQDIQL LAGTLRDNLV SGARYIEDEL ILQAAELAGV
HEFARLHPDG YELQVGERGQ NLSGGQRQNV ALGRALLLNP QILLLDEPTS AMDNTGEERL
KQRLQAVVEG KTVLLVTHRA SLLSLVDRLI VIDRGQIVAD GPKAAVMDAL KKGQISVA
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