| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0180 |
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| Symbol | |
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| ID | 5191940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 192964 |
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| End bp | 193920 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640584625 |
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| Product | anti-FecI sigma factor, FecR |
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| Protein accession | YP_001265539 |
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| Protein GI | 148545437 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.282303 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCG CACGCCCTGA TACAAAAACG GTCAGGCAGG CCATTCAGTG GATGCTGCGG
CTGCGTGAAA GCGGGCACGA TCCAGCTCTG CAACAACAGT GCGCGCATTG GCGCAGCAGC
CACCACGAAA ACGAACAGGC CTGGCAGCGT GTGGTTCACC TTCATCAGGA CCTTGACCTG
CGCGCTATTC CCGGTGCCGG GCTGGCATTG CAGACACTGG AAACCAGCCA GCAGCGCCTG
CGCCGCCGAC AGGCGCTGAA GCTGCTTGGC GGCGTTGTCA TGGCAGGATC TGCGAGCTGG
CTGGCCAAAG ACCTCGATAC TGTGAGTGCC TGGACGTCAG ACTATGCCAC CGGCACGGGC
GAGCGACGCG TCTTCACCCT GCCCGATGGC TCGCTGATGC AACTCAATAC CTGCAGTGCC
GTGGACCTGG CCTTCCATGA TCAACAGCGT CTGGTCCGCC TGAAGCTTGG GGAATTGATG
ATCAACTGCA ACCCCCGGCA TCCCCTGCTG GTACAAACCC GCGACGCGCT GCTGGAAGGC
TTCGAAGGAC GCTTTGTGGC CTATCAGGAT AGCGACTGCA CACGTGTCAG CGTCAGCCAC
GGCAAAGTGG CGATACACCG GCCTGGTACT GGCCAACTTC AGTGGATCGA AGGTGGCCAG
AACTGGCGCC TGGATGCTCA AGGTGCGCAC CGGCTCGCGC ACATGGAGAT GGATGCGATG
GCCTGGACTG AAGGGTTGAT CGTCACTCAG GACATGCGCC TCTCCAACTT CCTCGCGCAG
GTCAGCCGCT ATCGCCATGG TTACCTGGGC TGCAGCAATG AGATTGCCGA CCTGCGCCTG
TCGGGGGTGT TCCGCCTCGA AGACCCGGAA CAACTGCTTC GGCTGCTACC GCAGACGTTG
CCCGTACGAC TTCGTCGACG TACACGCTGG TGGGTGCATG TAGAGAGCAT GACCTGA
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| Protein sequence | MTVARPDTKT VRQAIQWMLR LRESGHDPAL QQQCAHWRSS HHENEQAWQR VVHLHQDLDL
RAIPGAGLAL QTLETSQQRL RRRQALKLLG GVVMAGSASW LAKDLDTVSA WTSDYATGTG
ERRVFTLPDG SLMQLNTCSA VDLAFHDQQR LVRLKLGELM INCNPRHPLL VQTRDALLEG
FEGRFVAYQD SDCTRVSVSH GKVAIHRPGT GQLQWIEGGQ NWRLDAQGAH RLAHMEMDAM
AWTEGLIVTQ DMRLSNFLAQ VSRYRHGYLG CSNEIADLRL SGVFRLEDPE QLLRLLPQTL
PVRLRRRTRW WVHVESMT
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