Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0176 |
Symbol | |
ID | 5193725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 181074 |
End bp | 181991 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640584617 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001265535 |
Protein GI | 148545433 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.175853 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGTA AGATCCCCAG TACCGCCGCC CTGATTTGCT TCGAGGCGGC AGCCCGTAAC GAGAGCTTTA CCAAGGCTGC CCAGGAACTC GCGCTGACCC AGGGTGCCGT CTGTCGGCAG ATCGGTGGCC TGGAAGCCTT CCTTAATGTG GAACTGTTCC GTCGCTCGCG CCGCGGCGTA AGGCTGACCG AAGCCGGCCT GTCCTACAGT CGCCAGGTGG CGGCCCAACT GGACGCCGTG GAGCGCGATA CCTTGTCGGT CATGCGCCAG CAAGGCGCCA ATGTGATCGA GCTGGCGGTA GTGCCGACGT TTGGCACTCA ATGGCTGCTA CCACGGCTCA AGGACTTCCA GCAGCGCCAC CCGGAGGTCA CAGTCAACCT CACCAACCGC ACCCGGCCAT TCCTGTTCGC CGACACTACC TTCGATGCCG CCATCTATTT TGGTGATGCG GACTGGTCAG GCACCCAGTC GCACCAACTG ATGGGTGAAA ACCCAGTACC CGTGTGCAGC CCGGCACTGC TGAACGGCCA GGGCATGCTC GAGGCACGCC ACATCGCGCA GCTACCACTG CTGCAGCAGA GCACGCGCCC GTATGCCTGG CGGCAATGGT TCGGCAGTGT GGGCATGAAT GTGGAGCGCG ACATGACAGG CCCGCGCTAT GAACTATTCT CGATGCTCGC CCAGGCGGCC ATGCACGATA TGGGCATTGC CCTGATACCG CCGTTCCTGA TCCAGCGGGA GTTGGAGGAG GGACGGCTGG TGGTCGCTAA CAGGCATGCC CTGAGTAGCG ACAAGGCCTA CTATCTGATG ATTCCAGAGC GCAAGGTGGA GTCGGCGTCG CTACGCGCCT TTCGCGACTG GCTGGTAAGC CAGGCTCAGG CCTACCTGAA TAGATCAGGG GCAAGCGCGA CAAATTGA
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Protein sequence | MRRKIPSTAA LICFEAAARN ESFTKAAQEL ALTQGAVCRQ IGGLEAFLNV ELFRRSRRGV RLTEAGLSYS RQVAAQLDAV ERDTLSVMRQ QGANVIELAV VPTFGTQWLL PRLKDFQQRH PEVTVNLTNR TRPFLFADTT FDAAIYFGDA DWSGTQSHQL MGENPVPVCS PALLNGQGML EARHIAQLPL LQQSTRPYAW RQWFGSVGMN VERDMTGPRY ELFSMLAQAA MHDMGIALIP PFLIQRELEE GRLVVANRHA LSSDKAYYLM IPERKVESAS LRAFRDWLVS QAQAYLNRSG ASATN
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