| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0160 |
|---|
| Symbol | |
|---|
| ID | 5192492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 163431 |
|---|
| End bp | 164564 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640584601 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001265519 |
|---|
| Protein GI | 148545417 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
|---|
| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCCTA TGACCACCCC CAGCGCCACC CTGGACACCA GCTGCCAACC GGCCTGCCTG
CGTATTACCG GTGACTGGAC CCTGGCACAC TACGCCAACC TCAAGCGCGA GAGCGAGCGC
CTGCGCACGC AGTGCGCTGC CAACACGATC GCCGACCTCA GCCAGCTGGG CCGCCTGGAC
ACCGCCGGTG CTTCGCTGCT GGCCGAACTG CTAGGCTCCG AGCGCCTGTC GCGCTGCACC
CACGCGCTGC CTGAAGCCAG CCAGGCGCTG CTGAAGAATG TCTACTGTTC GGTCCAGGAT
TACTGCATCC CGGTCAAGGA GCCCGAGCGC AATGTGCTGT TGTTGCTGCT GGAGCGCATC
GGCTGCGCCG TCGGCACGCT GTGGCAGGAC AGCATGCAAC TGCTTGGTTT CGTTGGTGTG
ATTCTAGAAA CCCTGCTGCG CCGCGCCTTC CAGCCACATC GCTGGCGCTT CACTCCTGTG
GTGGCACACA TTGAACAGAC CGGCCTGGAT GCCGCGCCCA TCGTTGCGTT GCTGACCTTT
CTGGTGGGCG CCGTAGTCGC TTTTCTCGGC GCCACGGTGC TGGCCGACTT CGGCGCGACC
ATTTTCACCG TCGACCTGGT TGCGTTCTCG TTCCTGCGCG AGTTCGCCGT GCTGCTGACC
GCCATTCTCA TGGCCGGCCG CACTGCCAGC GCGTTCACCG CGCAGATCGG CTCGATGAAG
GCCAACGAAG AAATTGACGC CATCCGCACG CTGGGCCTCA ACCCCATGGA ACTGCTGGTG
GTGCCGCGGG TACTGGCCCT GCTGATTTCG CTACCGTTGC TCACCTTTGT CGCGATGATC
TGCGGCATCG TTGGCGGTGC GGTGGTATGC GCCCTGACGC TGGATATTTC GCCGGCCATG
TTCCTGTCGC TGCTGCAAAG CGACATTGGC GTGCAGCACT TTCTGGTAGG CCTGGCCAAG
GCACCGTTCT TCGCCTTCCT GATCGCCGCC ATCGGCTGCC TGGAAGGCTT CAAGGTCAGC
GGCAGCGCCG AGTCGGTGGG GGCACACACC ACCTCGGCAG TGGTGCAGTC GATTTTTGTG
GTCATCGTGC TGGATGCGGT GGCAGCGCTG TTCTTCATGG AGATGGGCTG GTGA
|
|---|
| Protein sequence | MEPMTTPSAT LDTSCQPACL RITGDWTLAH YANLKRESER LRTQCAANTI ADLSQLGRLD
TAGASLLAEL LGSERLSRCT HALPEASQAL LKNVYCSVQD YCIPVKEPER NVLLLLLERI
GCAVGTLWQD SMQLLGFVGV ILETLLRRAF QPHRWRFTPV VAHIEQTGLD AAPIVALLTF
LVGAVVAFLG ATVLADFGAT IFTVDLVAFS FLREFAVLLT AILMAGRTAS AFTAQIGSMK
ANEEIDAIRT LGLNPMELLV VPRVLALLIS LPLLTFVAMI CGIVGGAVVC ALTLDISPAM
FLSLLQSDIG VQHFLVGLAK APFFAFLIAA IGCLEGFKVS GSAESVGAHT TSAVVQSIFV
VIVLDAVAAL FFMEMGW
|
|---|
| |