Gene Pput_0159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0159 
Symbol 
ID5192491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp162643 
End bp163434 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content65% 
IMG OID640584600 
ProductABC transporter related 
Protein accessionYP_001265518 
Protein GI148545416 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGGCC AGGATTGCGT AATCGAAGCC CGCGGCATCT GCAACCGCTT CGGCCGCCAG 
GTGGTACATG AAAACCTAGA CCTTGACCTG TACCGCGGCG AAATCCTCGC CGTGGTAGGC
GGCTCAGGCA GCGGCAAGTC GGTGCTTCTG CGCAGCATCA TTGGCCTGCG CCGGCCCAAT
GAAGGGCAGA TCAAGGTGCT CGGCCAGGAC CTGACCGGCC TGCGCGAAGA ACAGCGTTCA
CTGGTCGAGC GGCGCTTTGG CGTGCTGTTC CAAAAGGGTG CGCTGTTCTC TTCGCTGACG
GTGACCGAAA ACGTGGCCTT GCCGCTGATC GAGCACGCCG GGCTGTCCCG TAGCGATGCC
GAGCACCTGG CCGGGGTGAA ACTGGCCCTT GCCGGGTTGC CGATCTCGGC TGCCGACAAG
TACCCGGCCT CGTTGTCGGG GGGCATGATC AAGCGCGCAG CGCTGGCCCG CGCCCTGGCC
CTGGACCCGG ACATCCTGTT CCTCGACGAA CCCACGGCTG GCCTGGACCC GATCGGTGCC
GCGGCATTTG ACCAGTTGAT CCTTACCCTG CGCGATGCTC TGGGGCTGTC GGTGTTCCTG
ATCACCCACG ACCTCGACAC CCTGTACACC ATCACCGACC GCATCGCGGT GCTGTCGCAA
AAGAAAGTCC TGGTGGCCGG CCCGCTGGCC GAGGTCGAGA AGACCAACGA CACCTGGATC
CAAGAATACT TTCACGGCCC ACGCGGGCGC GCCGCCGAAC AGGCTGCCAC CCGTGCCGGG
CAGGAGCGCT GA
 
Protein sequence
MSGQDCVIEA RGICNRFGRQ VVHENLDLDL YRGEILAVVG GSGSGKSVLL RSIIGLRRPN 
EGQIKVLGQD LTGLREEQRS LVERRFGVLF QKGALFSSLT VTENVALPLI EHAGLSRSDA
EHLAGVKLAL AGLPISAADK YPASLSGGMI KRAALARALA LDPDILFLDE PTAGLDPIGA
AAFDQLILTL RDALGLSVFL ITHDLDTLYT ITDRIAVLSQ KKVLVAGPLA EVEKTNDTWI
QEYFHGPRGR AAEQAATRAG QER