Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0159 |
Symbol | |
ID | 5192491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 162643 |
End bp | 163434 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640584600 |
Product | ABC transporter related |
Protein accession | YP_001265518 |
Protein GI | 148545416 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGGCC AGGATTGCGT AATCGAAGCC CGCGGCATCT GCAACCGCTT CGGCCGCCAG GTGGTACATG AAAACCTAGA CCTTGACCTG TACCGCGGCG AAATCCTCGC CGTGGTAGGC GGCTCAGGCA GCGGCAAGTC GGTGCTTCTG CGCAGCATCA TTGGCCTGCG CCGGCCCAAT GAAGGGCAGA TCAAGGTGCT CGGCCAGGAC CTGACCGGCC TGCGCGAAGA ACAGCGTTCA CTGGTCGAGC GGCGCTTTGG CGTGCTGTTC CAAAAGGGTG CGCTGTTCTC TTCGCTGACG GTGACCGAAA ACGTGGCCTT GCCGCTGATC GAGCACGCCG GGCTGTCCCG TAGCGATGCC GAGCACCTGG CCGGGGTGAA ACTGGCCCTT GCCGGGTTGC CGATCTCGGC TGCCGACAAG TACCCGGCCT CGTTGTCGGG GGGCATGATC AAGCGCGCAG CGCTGGCCCG CGCCCTGGCC CTGGACCCGG ACATCCTGTT CCTCGACGAA CCCACGGCTG GCCTGGACCC GATCGGTGCC GCGGCATTTG ACCAGTTGAT CCTTACCCTG CGCGATGCTC TGGGGCTGTC GGTGTTCCTG ATCACCCACG ACCTCGACAC CCTGTACACC ATCACCGACC GCATCGCGGT GCTGTCGCAA AAGAAAGTCC TGGTGGCCGG CCCGCTGGCC GAGGTCGAGA AGACCAACGA CACCTGGATC CAAGAATACT TTCACGGCCC ACGCGGGCGC GCCGCCGAAC AGGCTGCCAC CCGTGCCGGG CAGGAGCGCT GA
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Protein sequence | MSGQDCVIEA RGICNRFGRQ VVHENLDLDL YRGEILAVVG GSGSGKSVLL RSIIGLRRPN EGQIKVLGQD LTGLREEQRS LVERRFGVLF QKGALFSSLT VTENVALPLI EHAGLSRSDA EHLAGVKLAL AGLPISAADK YPASLSGGMI KRAALARALA LDPDILFLDE PTAGLDPIGA AAFDQLILTL RDALGLSVFL ITHDLDTLYT ITDRIAVLSQ KKVLVAGPLA EVEKTNDTWI QEYFHGPRGR AAEQAATRAG QER
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