Gene Pput_0155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0155 
SymbolgltP 
ID5192978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp158382 
End bp159710 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content59% 
IMG OID640584596 
Productglutamate/aspartate:proton symporter 
Protein accessionYP_001265514 
Protein GI148545412 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGG CAAAACTGAG CCTCGCCTGG CAGATCGTCA TCGGTCTGGT CCTGGGTGTT 
GCAATCGGCG CGCTACTGAA TCATTTCAGT GCAGAAAAGG CATGGTGGAT CAGCAACGTC
CTTCAGCCCG CTGGTGACAT CTTCATCCGC CTGATCAAGA TGATCGTCGT CCCGATCGTG
ATTTCGTCGC TGATCGTGGG TATCGCCGGT GTTGGCGACG CGAAGAAACT GGGCAGCATC
GGCCTGAAGA CCATCATCTA CTTCGAAGTG GTGACCACGA TCGCCATCGT CGTAGGCCTG
GTACTGGCCA ACCTGTTCCA TCCAGGTGCC GGCATCGACA TGAGCACCCT GGGCACGGTG
GACATCTCCA AGTACCAGGC GACAGCGGCC GAAGTGCAGC ATGAGCACGC GTTCATCGAA
ACCCTGCTCA ACCTGATTCC GTCGAACATC TTCGCAGCGC TGATGCGTGG CGAAATGCTG
CCGATCATCT TCTTCTCGGT GATGTTCGGC CTGGGTCTGT CGAGCCTGCA GGCAGAGCTG
CGTGACCCGC TGGTTCGTAC CTTCCAGGCT GTTTCGGAAA CCATGTTCAA GGTCACTCAC
ATGATCATGA ACTATGCCCC GATCGGCGTG TTCGCCCTGA TTGCCGTGAC CGTGGCCAAC
TTCGGTTTCA GCTCGCTGCT GCCGCTGGCC AAGCTGGTGC TGCTGGTGTA CTTCGCCATC
GCCTTCTTCG CCTTCATGGT ATTGGGCCTG GTTGCCCGCC TGTTCGGCTT CTCGGTGATC
AAGATCATGC GCATCATGAA AGATGAGCTG ATCCTGGCCT ACTCCACCTC CAGCTCGGAA
ACCGTGCTGC CGCGGGTGAT CGAGAAGATG GAGAAGTACG GTGCGCCAAA GTCGATCTGC
TCGTTCGTGG TACCGACCGG CTACTCGTTC AACCTCGACG GTTCGACCCT GTATCAGAGC
ATCGCGGCGA TCTTCATTGC CCAGTTGTAC GGTATCGACC TGTCGTGGAG CCAGCAGCTG
CTGCTGGTAC TGACCCTGAT GGTCACTTCC AAAGGTATCG CGGGTGTGCC GGGCGTATCG
TTCGTGGTAC TGCTGGCCAC CTTGGGCAGC GTGGGCATTC CGCTGGAAGG CCTGGCCTTC
ATCGCTGGCG TGGACCGCAT CATGGACATG GCCCGAACTG CGCTGAACGT TGTGGGCAAC
GCCTTGGCTG CATTGGTCAT TGCTCGCTGG GAAGGCATGT ACGACGCGGT CAAGGGCGAG
CAGTACTACG CCTCGCTGCT GGCCGAGAAG CAGGAAGCTG CAGTGGTTGG CGAAACCGCC
AAGCGCTGA
 
Protein sequence
MKKAKLSLAW QIVIGLVLGV AIGALLNHFS AEKAWWISNV LQPAGDIFIR LIKMIVVPIV 
ISSLIVGIAG VGDAKKLGSI GLKTIIYFEV VTTIAIVVGL VLANLFHPGA GIDMSTLGTV
DISKYQATAA EVQHEHAFIE TLLNLIPSNI FAALMRGEML PIIFFSVMFG LGLSSLQAEL
RDPLVRTFQA VSETMFKVTH MIMNYAPIGV FALIAVTVAN FGFSSLLPLA KLVLLVYFAI
AFFAFMVLGL VARLFGFSVI KIMRIMKDEL ILAYSTSSSE TVLPRVIEKM EKYGAPKSIC
SFVVPTGYSF NLDGSTLYQS IAAIFIAQLY GIDLSWSQQL LLVLTLMVTS KGIAGVPGVS
FVVLLATLGS VGIPLEGLAF IAGVDRIMDM ARTALNVVGN ALAALVIARW EGMYDAVKGE
QYYASLLAEK QEAAVVGETA KR