| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0141 |
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| Symbol | engB |
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| ID | 5191519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 144265 |
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| End bp | 144897 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640584582 |
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| Product | ribosome biogenesis GTP-binding protein YsxC |
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| Protein accession | YP_001265500 |
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| Protein GI | 148545398 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0218] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.305337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGTCA AGAACCCCAT CCTCGGCCTC TGCCAGAAAG CCAAATTCGC CCTCAGCGCA
GCCAAGGTCG AACAATGCCC GGACGACCAG GGCTACGAGG TGGCTTTTGC CGGCCGTTCC
AACGCCGGCA AATCCAGCGC CCTCAATACC CTGACTCATG CCAGCCTGGC GCGTACCTCG
AAAACGCCCG GACGCACCCA GCTGTTGAAT TTCTTCAGTC TGGACGATGA ACGGCGTTTG
GTCGACCTGC CGGGCTATGG TTATGCAAAA GTCCCGATTC CGCTCAAGCA GCACTGGCAG
AAACACCTGG AAGCCTACCT GGGCAGCCGT GAGTGCCTGC GTGGCGTGAT CCTGATGATG
GACGTGCGTC ACCCGATGAC CGACTTCGAC AAGATGATGC TCGACTGGGC CAAGGCCAGC
AGCATGCCGA TGCACATCCT GCTGACCAAG GCCGACAAGC TGACCCACGG CGCGGGCAAG
AACACACTGC TGAAAGTACA GTCGGAAATC CGCAAGGGCT GGGGGGATGG CGTGACCATC
CAGCTGTTCT CGGCACCCAA GCGCCTGGGC GTGGAAGACG CCTACCGAGT GCTGGCAGAC
TGGATGGAAC TGGAAGACAA GCCGGTCATT TAA
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| Protein sequence | MQVKNPILGL CQKAKFALSA AKVEQCPDDQ GYEVAFAGRS NAGKSSALNT LTHASLARTS
KTPGRTQLLN FFSLDDERRL VDLPGYGYAK VPIPLKQHWQ KHLEAYLGSR ECLRGVILMM
DVRHPMTDFD KMMLDWAKAS SMPMHILLTK ADKLTHGAGK NTLLKVQSEI RKGWGDGVTI
QLFSAPKRLG VEDAYRVLAD WMELEDKPVI
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