Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0140 |
Symbol | |
ID | 5191518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 141115 |
End bp | 143862 |
Gene Length | 2748 bp |
Protein Length | 915 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640584581 |
Product | DNA polymerase I |
Protein accession | YP_001265499 |
Protein GI | 148545397 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAG CGCCCCTCGT CCTGGTGGAC GGTTCCTCCT ACCTTTATCG CGCCTTCCAC GCGCTGCCAC CGCTGACCAC GTCCAAGGGC ATGCCGACCG GTGCGGTGAA GGGTGTGCTG AACATGCTCA AGAGCCTGCG CAAGCAATAT CCCGACAGCC TGTTCGCCGT GGTGTTCGAC GCCAAGGGCG GCACTTTCCG CGATGCCATG TTCGCTGAGT ACAAGGCCAA CCGCCCCAGC ATGCCGGATG ACCTGCGGGT ACAGATCGAG CCGCTGCACG CCAGCGTCAA GGCGCTGGGC TACCCGCTGC TGTGTGTGGA GGGTGTCGAG GCTGACGACG TGATCGGCAC CCTGGCGCGC AGCAGTGCCG CCCTGGGTCG CCCGGTGATC ATCTCGACCG GTGACAAGGA CATGGCGCAG CTGGTGGACG GGCACATTAC CTTGGTCAAC ACCATGACCG GAAGCGTGCT GGACGTGGCT GGCGTGCACG AGAAGTTCGG CGTCGGCCCG GAACACATCA TCGACTTCCT GGCCCTGATG GGTGACAAGG TCGACAACAT CCCGGGCGTG CCGGGCGTGG GCGAAAAAAC GGCAGTGGGG CTGCTGACCG GCATCGGCGG CGGTCTCAGC GACCTTTACG CCAACCTGGA CAAGGTGCCA ACGCTGGCCA TTCGCGGCGC CAAGACCTTG CCGGCCAAGC TGGAGGAGCA CCGCGACGCG GCATTCCTGT CCTACGAGCT GGCCACCATC AAGGTTGACG TGCCGCTGGA TGTCGAGGTC GAGGCGCTGG TGTGCGGTGA ACCTGACCGC GAGGCGTTGC TGGCGTTGTA CACCGAGATG GAGTTCAAGA GCTGGGTCGC CGAAGTGCAG CGCGATGCGG CCAAGGCTGG TGATGATGTC GGCCCGGCTG TGGAGCCTGC GGCCAAGGTC GAGCCCAAAT ACGAAACCAT CCTCGACCAG GCCCGTTTCG ACGCCTGGCT GGAGAAGCTG CGCCAGGCAC CGCTGTTCGC CTTCGACACC GAGACCACCG GCCTGGACGC CCAGCAGGCG CAGTTGGTCG GCCTGTCCTT CGCTGTCGAG CCGCATGAAG CGGCCTATGT GCCGCTGGCC CACGATTATG AAGGCGCGCC GGTCCAGCTG GACCGCGAGG CCGTGCTGTT GGCGCTGAAG CCCTTGCTGG AGGACCCGGC CAAGGCCAAG GTCGGGCAGA ACGCCAAGTA CGACATCAAC ATCCTCGCCA ATGGCTCCCC CCCTATCGAG ATGCGCGGTG TGGCCTATGA CACCATGCTC GAGTCATACG TGCTGAACTC CACCGCCACC CGTCATGACA TGGACAGCCT GGCGCAGAAG TACCTCGACC ACACCACGAT CGCCTTCGAG GACATCGCCG GCAAGGGTGC CAAGCAGCTT ACCTTCAACC AGATCACCCT GGACAAGGCC GGCCCCTACG CCGCCGAAGA CGCCGACATC ACCCTGCGCC TGCACCATGC ATTACAGGCC CGCCTGGCAC AGACGCCGAG CGTGCAACCG GTGCTGATGG ATATCGAGAT GCCGCTGGTG CCGGTGCTGG CCAGGATCGA GCGCCAGGGT GCGCTGGTCG ATGCCGAGCT GTTGAAGGTA CAGAGCGGTG AGCTGGGCGT GAAGATGGCT GAGCTGGAGC TGCGTGCCTA CGAGCTCGCC GGTGAGACGT TCAACCTCGG CTCGCCCAAG CAGCTGGGCA CGATTCTTTA CGACAAGCTG GGCATGCCGG TGCTGAGCAA GACCGCCAAG GGCCAGCCAT CCACCGCCGA AGCAGTGCTC GACGAACTGG CCGAACAAGG CTACCCGCTG CCAGAGGTGC TGATGCAGTA CCGCAGCCTG AGTAAGCTCA AGAGCACCTA CACCGACAAG TTACCGGGGC AGATCAACCC GCGCACCGGG CGCATCCACA CGTCCTACCA GCAGGCGGTG GCGGCCACCG GCCGGTTGTC GTCGAGCGAC CCGAACCTGC AGAACATTCC GATCCGCACC GCTGAAGGGC GGCGTATTCG CCAGGCGTTC ATCGCCAGTC CGGGCTACAA GCTTCTGGCG GCGGACTATT CACAGATCGA GCTGCGCATC ATGGCCCACC TGGCCAAGGA CGAAGGCTTG CTGCATGCCT TCCGCAATGA CCTGGACGTG CACCGCGCCA CGGCAGCCGA AGTGTTCGGT GTGGCCCTGG AAGACGTGAC CACCGACCAG CGCCGCAGCG CCAAGGCCAT CAACTTCGGC CTGATTTACG GCATGAGCGC CTTTGGCCTG GCCAAGCAGA TCGGCGTCGA CCGCAAGCAG TCACAGGACT ACATCGACCG TTATTTTGCC CGCTACCCGG GCGTGCTGGC CTATATGGAG CGCACCCGCG CCCAGGCGGC CGAGCAAGGC TTTGTCGAAA CCCTGTTTGG CCGCCGGCTG TACTTGCCAG ACATCAATGC CAAGAACCCT GCCCTGCGCA AGGGCGCCGA GCGCACGGCG ATCAACGCCC CGATGCAGGG TACTGCTGCC GACATCATCA AGCGGGCCAT GGTCAAAGTA GATAACTGGT TGAGCGAGAG CGGGCTGGAT GCCCGGGTGA TCCTTCAGGT GCACGACGAA CTGGTGCTTG AGGTACGCGA GGACCTGGTG GAGCAGGTGA AAGATGAAAT TCGCCAGCAC ATGAGCCAGG CCGCGCAGCT GGATGTGCCG CTGCTTGTCG AAGCAGGCGT TGGTGCGAAT TGGGACGAAG CTCACTGA
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Protein sequence | MSQAPLVLVD GSSYLYRAFH ALPPLTTSKG MPTGAVKGVL NMLKSLRKQY PDSLFAVVFD AKGGTFRDAM FAEYKANRPS MPDDLRVQIE PLHASVKALG YPLLCVEGVE ADDVIGTLAR SSAALGRPVI ISTGDKDMAQ LVDGHITLVN TMTGSVLDVA GVHEKFGVGP EHIIDFLALM GDKVDNIPGV PGVGEKTAVG LLTGIGGGLS DLYANLDKVP TLAIRGAKTL PAKLEEHRDA AFLSYELATI KVDVPLDVEV EALVCGEPDR EALLALYTEM EFKSWVAEVQ RDAAKAGDDV GPAVEPAAKV EPKYETILDQ ARFDAWLEKL RQAPLFAFDT ETTGLDAQQA QLVGLSFAVE PHEAAYVPLA HDYEGAPVQL DREAVLLALK PLLEDPAKAK VGQNAKYDIN ILANGSPPIE MRGVAYDTML ESYVLNSTAT RHDMDSLAQK YLDHTTIAFE DIAGKGAKQL TFNQITLDKA GPYAAEDADI TLRLHHALQA RLAQTPSVQP VLMDIEMPLV PVLARIERQG ALVDAELLKV QSGELGVKMA ELELRAYELA GETFNLGSPK QLGTILYDKL GMPVLSKTAK GQPSTAEAVL DELAEQGYPL PEVLMQYRSL SKLKSTYTDK LPGQINPRTG RIHTSYQQAV AATGRLSSSD PNLQNIPIRT AEGRRIRQAF IASPGYKLLA ADYSQIELRI MAHLAKDEGL LHAFRNDLDV HRATAAEVFG VALEDVTTDQ RRSAKAINFG LIYGMSAFGL AKQIGVDRKQ SQDYIDRYFA RYPGVLAYME RTRAQAAEQG FVETLFGRRL YLPDINAKNP ALRKGAERTA INAPMQGTAA DIIKRAMVKV DNWLSESGLD ARVILQVHDE LVLEVREDLV EQVKDEIRQH MSQAAQLDVP LLVEAGVGAN WDEAH
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