Gene Pput_0134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0134 
Symbol 
ID5194081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp136615 
End bp137397 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content64% 
IMG OID640584575 
ProductABC-3 protein 
Protein accessionYP_001265493 
Protein GI148545391 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATT TTCTTCTCTA CGCCTTGCTT GCCGGCTTGT CCCTGGCACT GGTTGCAGGC 
CCACTGGGCT CCTTCGTGGT ATGGCGGCGC ATGGCCTATT TTGGCGACAC CCTGTCTCAC
GCCGCGCTGC TCGGTGTGGC CCTGGGCTTT GCCCTGGATG TCAGCCCGGC GCTGGCGGTA
ACCGTGGGCT GCCTGTTGCT GGCGATTCTG CTGGTGACAT TGCAGCAACG CCAGCCGCTG
GCCTCCGACA CCCTCCTGGG TATCCTGGCC CCCAGCACCT TGTCGCTGGG CCTGGTGGTG
CTGAGCTTCA TGCACGATGT GCGCATTGAC CTAATGGCTT ACCTGTTCGG CGATCTGCTG
GCCATCAGCA CCACCGACCT GGCCTGGATC CTCGGCGGCA GTGCACTGGT CCTGCTGCTG
CTCGCTGTGC TGTGGCGGCC GCTGCTGGCG GTTACCGTGC ACGAAGAACT GGCCATGGTT
GAAGGCCTGC CCGTGGCCGG CTTGCGCATG GCGCTGATGC TGCTGATCGC GGTGGTAATT
GCGGTTGCCA TGAAAATCGT TGGCGTGTTG CTGATTACCT CACTGCTGAT CATTCCTGCC
GCTGCGGCAC AGCGCCACGC CCGCTCACCA GAGCAGATGG CCCTGGGTGC CAGCCTGCTG
GGTGTCACCG CAGTGTGCGG CGGCCTGGCC ATGTCCTGGT TCAAGGACAC CCCCGCCGGG
CCCTCGATCG TGGTCTGCGC CGCGGTGCTA TTCTTGCTGA GCCTGGCTCT GCCAAAACGC
TGA
 
Protein sequence
MADFLLYALL AGLSLALVAG PLGSFVVWRR MAYFGDTLSH AALLGVALGF ALDVSPALAV 
TVGCLLLAIL LVTLQQRQPL ASDTLLGILA PSTLSLGLVV LSFMHDVRID LMAYLFGDLL
AISTTDLAWI LGGSALVLLL LAVLWRPLLA VTVHEELAMV EGLPVAGLRM ALMLLIAVVI
AVAMKIVGVL LITSLLIIPA AAAQRHARSP EQMALGASLL GVTAVCGGLA MSWFKDTPAG
PSIVVCAAVL FLLSLALPKR