Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0134 |
Symbol | |
ID | 5194081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 136615 |
End bp | 137397 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640584575 |
Product | ABC-3 protein |
Protein accession | YP_001265493 |
Protein GI | 148545391 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATT TTCTTCTCTA CGCCTTGCTT GCCGGCTTGT CCCTGGCACT GGTTGCAGGC CCACTGGGCT CCTTCGTGGT ATGGCGGCGC ATGGCCTATT TTGGCGACAC CCTGTCTCAC GCCGCGCTGC TCGGTGTGGC CCTGGGCTTT GCCCTGGATG TCAGCCCGGC GCTGGCGGTA ACCGTGGGCT GCCTGTTGCT GGCGATTCTG CTGGTGACAT TGCAGCAACG CCAGCCGCTG GCCTCCGACA CCCTCCTGGG TATCCTGGCC CCCAGCACCT TGTCGCTGGG CCTGGTGGTG CTGAGCTTCA TGCACGATGT GCGCATTGAC CTAATGGCTT ACCTGTTCGG CGATCTGCTG GCCATCAGCA CCACCGACCT GGCCTGGATC CTCGGCGGCA GTGCACTGGT CCTGCTGCTG CTCGCTGTGC TGTGGCGGCC GCTGCTGGCG GTTACCGTGC ACGAAGAACT GGCCATGGTT GAAGGCCTGC CCGTGGCCGG CTTGCGCATG GCGCTGATGC TGCTGATCGC GGTGGTAATT GCGGTTGCCA TGAAAATCGT TGGCGTGTTG CTGATTACCT CACTGCTGAT CATTCCTGCC GCTGCGGCAC AGCGCCACGC CCGCTCACCA GAGCAGATGG CCCTGGGTGC CAGCCTGCTG GGTGTCACCG CAGTGTGCGG CGGCCTGGCC ATGTCCTGGT TCAAGGACAC CCCCGCCGGG CCCTCGATCG TGGTCTGCGC CGCGGTGCTA TTCTTGCTGA GCCTGGCTCT GCCAAAACGC TGA
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Protein sequence | MADFLLYALL AGLSLALVAG PLGSFVVWRR MAYFGDTLSH AALLGVALGF ALDVSPALAV TVGCLLLAIL LVTLQQRQPL ASDTLLGILA PSTLSLGLVV LSFMHDVRID LMAYLFGDLL AISTTDLAWI LGGSALVLLL LAVLWRPLLA VTVHEELAMV EGLPVAGLRM ALMLLIAVVI AVAMKIVGVL LITSLLIIPA AAAQRHARSP EQMALGASLL GVTAVCGGLA MSWFKDTPAG PSIVVCAAVL FLLSLALPKR
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