Gene Pput_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0121 
Symbol 
ID5193142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp125078 
End bp125644 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content63% 
IMG OID640584562 
Productcytochrome C oxidase assembly protein 
Protein accessionYP_001265480 
Protein GI148545378 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3175] Cytochrome oxidase assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCC TATCGGTGAA ACGCCTGGTA ACGCGCCTGT TGATGCTGAC GGTGGTGATG 
TTCGCCTTCG GCTTCGCGCT GGTGCCGATC TACGACGTCA TGTGCAAAGC GTTCGGTATC
AACGGCAAGA CCGGCGGCCA ATACGAAGGT AGCCAGGTCA GTGACCCGAC GCGTGCTGTG
CGGGTGCAGT TCATGTCGAC CAATGCCAGC GACATGGTCT GGGACTTCTA CTCCACTGCC
GACCAGCTGG AGGTCAACCC GGGGGCGGTG AACCAGATGA TCTTCATTGC CCACAACCCG
ACCGACCGGC CGATGAGTGC GCAGGCAATA CCCAGCATTA CCCCGGCCGA GGCCGCGGCC
TACTTCCACA AGACCGAGTG CTTCTGCTTT ACCCAGCAGG TGCTGCAGCC CGGCGAACGC
ATCGAGATGC CGGTGCGCTT CATCGTCGAC CGCGACCTGC CGGCCAGCGT GAAGCACCTG
ACACTGGCCT ACACCTTGTT CGACATCACC GCTCGCCACC CGCCGGTCGC GCACGTTGCG
GCGCAGGACG TCCAGGGCGC CCGTTAA
 
Protein sequence
MNGLSVKRLV TRLLMLTVVM FAFGFALVPI YDVMCKAFGI NGKTGGQYEG SQVSDPTRAV 
RVQFMSTNAS DMVWDFYSTA DQLEVNPGAV NQMIFIAHNP TDRPMSAQAI PSITPAEAAA
YFHKTECFCF TQQVLQPGER IEMPVRFIVD RDLPASVKHL TLAYTLFDIT ARHPPVAHVA
AQDVQGAR