| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0119 |
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| Symbol | |
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| ID | 5192062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 122308 |
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| End bp | 123435 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640584560 |
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| Product | cytochrome c oxidase, subunit II |
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| Protein accession | YP_001265478 |
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| Protein GI | 148545376 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2
[COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGAC ATCCACATGT CTGGATGGGC CTCCTGTTGT GGTCGGTTTT TGGCCAGGCA
AACGCCGCCT GGACCGTGAA CATGCACCCA GGGGCGACGG AAGTCTCCAA CGCCGTCTTC
GACCTGCACA TGACCATCTT CTGGATCTGC GTGATCATTG GCATCGTGGT GTTTGGCGCG
ATGTTCTGGT CAATGGTCAT CCACCGCCGC TCCACCGGCC AGCAGGCTGC GCATTTCCAC
GAGCACACCT GGGTGGAAAT CCTCTGGACG GTAGTTCCCT TCCTGATCCT GGTGGCCATG
GCCATCCCGG CCACCAAGAC GCTGATCGAC ATCTACGATG CCAGCGATTC GGACATCGAC
ATCCAGGTCA CGGGGTACCA GTGGAAATGG CACTACAAGT ACCTGGGCCA GGACGTGGAG
TTCTTCAGCA ACCTGGCCAC GCCCACCGAC CAGATCCACA ACAAGGCGCC CAAGGATGAG
CATTACCTGC TGGAAGTCGA CCAGCCGCTG GTGCTGCCGG TGGGCGCGAA AGTGCGCTTT
CTGGTCACTG CTGCCGACGT GATCCACTCC TGGTGGGTGC CAGCCTTCGC GGTCAAGCGC
GACGCCATCC CAGGCTTTGT CAACGAAGCC TGGACCCGGA TCGAAAAGCC AGGCATCTAC
CGCGGCCAGT GCACCGAGCT GTGCGGCAAG GACCACGGCT TCATGCCGGT GGTGGTCGAG
GTCAAGTCCA AGGCCGATTA CGACACCTGG CTGGGCGAGC GCAAGGCTGA AGCCGCCAAG
CTCAAGGAGC TGACCAGCAA GGAATGGACC CTGGAAGAGC TGGTGGCGCG AGGCGACAAG
GTCTACCACA CCACCTGCGT GGCCTGTCAC CAGGCCGAAG GCCAGGGCCT GCCGCCAATG
TTCCCGGCGC TCAAAGGCTC GAAGATTGCC ACCGGACCGA AGGAAGACCA CCTGAGCATT
GTCTTCCATG GCAAGCCCGG CACGGCCATG GCCGCTTTCG GCAAGCAGCT GTCGGAAGTC
GACATCGCTG CTGTAGTCAC CTACGAGCGC AATGCCTGGG GCAACAACAA AGGCGACATG
GTGACGCCGA AGGACGTGCT GGCGCTGAAG CAGGCAGAAG CCAAGTGA
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| Protein sequence | MMRHPHVWMG LLLWSVFGQA NAAWTVNMHP GATEVSNAVF DLHMTIFWIC VIIGIVVFGA
MFWSMVIHRR STGQQAAHFH EHTWVEILWT VVPFLILVAM AIPATKTLID IYDASDSDID
IQVTGYQWKW HYKYLGQDVE FFSNLATPTD QIHNKAPKDE HYLLEVDQPL VLPVGAKVRF
LVTAADVIHS WWVPAFAVKR DAIPGFVNEA WTRIEKPGIY RGQCTELCGK DHGFMPVVVE
VKSKADYDTW LGERKAEAAK LKELTSKEWT LEELVARGDK VYHTTCVACH QAEGQGLPPM
FPALKGSKIA TGPKEDHLSI VFHGKPGTAM AAFGKQLSEV DIAAVVTYER NAWGNNKGDM
VTPKDVLALK QAEAK
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