| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0111 |
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| Symbol | |
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| ID | 5195319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 112676 |
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| End bp | 114763 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640584552 |
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| Product | oligopeptidase A |
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| Protein accession | YP_001265470 |
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| Protein GI | 148545368 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCAGT GTTTCTTCTG CCAAGGTATC CAAACCGTGA CTGCGAACAA CCCGCTTCTG
CAATCCCACG ATCTGCCGCC CTTCTCGCAA ATTCGTGCCG AACACGTGTT GCCGGCGATC
GAAGCGATCC TGGCCGACAA CCGTAAAGCC ATTGCCGAGA TCCTCGAAAA GCAGGGCAAG
AACCCTACAT GGGCCGGCCT GGTGCTGGCC ATGGACGAAC TGAACGACCG CCTGGGCGCC
GCCTGGAGCC CGGTCAGCCA CCTCAATGCG GTGTGCAACA GCGCCGAGCT GCGCGAGGCT
TACGAGTCTT GCCTGCCAGC CCTGAGCGCC TACTCTACCG AACTGGGCCA GAACCGCGCG
CTGTTCGAAG CCTACCAGGC GCTGATCAAC AGCCCTGAGG CTGCCGGCTT CGACGTGGCG
CAAAAGACTA TCCTCGAGCA CGCCCTGCGT GACTTCCGCC TGTCGGGTAT CGACCTGCCG
GCGGACAAGC AGCAGCGTTA CGCCGAAGTG CAGAGCAAGC TCAGCGAGCT GGGCAGCCGT
TTTTCCAATC AGCTGCTCGA CGCCACCCAG GCATGGACCA AGCATGTTAC CGACGAAGCT
GCGCTGGCCG GCCTGACCGA TTCGGCCAAG GCGCAGATGG CCGCCGCAGC CCAGGCCAAG
GGCCTGGACG GCTGGCTGAT CACCCTCGAG TTCCCCAGCT ACTACGCGGT GATGACCTAC
GCCAGTGACC GCGCCCTGCG CGAAGAGCTA TACGCCGCCT ACTGCACCCG CGCCTCCGAC
CAGGGCCCGA ATGCCGGCCA GTTCGACAAT GGCCCGGTGA TGCGCGAAAT CCTCGACCTG
CGCCAGGAGC TGGCCGAACT GCTGGGCTAC AAGAACTACG CCGAGCTGAG CCTGGCCACC
AAGATGGCCG AGTCCAGCGA CCAGGTGCTG AGCTTCCTGC GTGACTTGGC CAAGCGTTCC
AAGCCGTTCG CCGCCCAGGA CCTGCAACAG CTCAAGGCCT ACGCTGCCGA ACAAGGCTGC
CCCGAGCTGG CCAGCTGGGA TGCCGGCTAC TTTGGCGAGA AGCTGCGCGA GCAGCGCTAC
AGTGTGTCGC AGGAAGCCCT GCGCGCCTAC TTCCCGATCG ACAAGGTGCT GGGCGGCCTG
TTCAGCATCG TGCAGCGCCT GTATGGCATC GAAATCGCCG AGCTGAAGGG CTTCGACAGC
TGGCACCCGG ACGTACGCCT GTTCGAGATC AAGGAAAATG GTCAGCACGT TGGCCGTTTC
TTCTTCGACC TGTACGCCCG CGCCAACAAG CGTGGGGGCG CCTGGATGGA CGGCGCCCGT
GACCGTCGCC GCACTGCCGG CGGCCAGCTG CAGAGCCCGG TGGCCAACCT GGTGTGCAAC
TTCACCCCGG CCGCGCCCGG CAAGCCCGCC TTGCTGACCC ATGATGAAGT CACCACCCTG
TTCCACGAAT TCGGTCACGG CCTGCACCAC ATGCTGACCC GCATTGAGCA TGCCGGCGTG
TCCGGCATCA ACGGTGTGGC CTGGGATGCG GTCGAGCTGC CCAGCCAGTT CATGGAAAAC
TGGTGCTGGG AGCCGGAAGG CCTGGCACTG ATTTCTGGTC ACTACGAAAC CGGCGCCGCC
CTGCCCCAGG ACCTGCTGGA CAAGATGCTG GCCGCGAAAA ACTTCCAGTC GGGCATGATG
ATGGTGCGCC AGTTGGAGTT CTCGCTGTTC GATTTCGAGC TGCACGCCAG CCATGGCGAC
GGCCGCAGCG TATTGCAGGT GCTCGAAGGT GTGCGTGACG AGGTGTCGGT CATGCGCCCG
CCGGCTTACA ACCGCTTCCC CAACAGCTTT GCGCACATTT TCGCGGGCGG TTACGCGGCG
GGCTACTACA GCTACAAGTG GGCCGAAGTG CTGTCGGCTG ACGCCTTCTC GCGCTTCGAG
GAAGAAGGCG TGCTGAACGC CGAGACCGGC CGCGCCTTCC GCGAGGCGAT CCTGGCCCGT
GGTGGTTCGC GCGAGCCGAT GGAGCTGTTT GTCGACTTCC GTGGCCGTGA GCCTTCCATC
GATGCATTGC TGCGCCACAG TGGTCTTACC GAGGACGCTG CAGCATGA
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| Protein sequence | MGQCFFCQGI QTVTANNPLL QSHDLPPFSQ IRAEHVLPAI EAILADNRKA IAEILEKQGK
NPTWAGLVLA MDELNDRLGA AWSPVSHLNA VCNSAELREA YESCLPALSA YSTELGQNRA
LFEAYQALIN SPEAAGFDVA QKTILEHALR DFRLSGIDLP ADKQQRYAEV QSKLSELGSR
FSNQLLDATQ AWTKHVTDEA ALAGLTDSAK AQMAAAAQAK GLDGWLITLE FPSYYAVMTY
ASDRALREEL YAAYCTRASD QGPNAGQFDN GPVMREILDL RQELAELLGY KNYAELSLAT
KMAESSDQVL SFLRDLAKRS KPFAAQDLQQ LKAYAAEQGC PELASWDAGY FGEKLREQRY
SVSQEALRAY FPIDKVLGGL FSIVQRLYGI EIAELKGFDS WHPDVRLFEI KENGQHVGRF
FFDLYARANK RGGAWMDGAR DRRRTAGGQL QSPVANLVCN FTPAAPGKPA LLTHDEVTTL
FHEFGHGLHH MLTRIEHAGV SGINGVAWDA VELPSQFMEN WCWEPEGLAL ISGHYETGAA
LPQDLLDKML AAKNFQSGMM MVRQLEFSLF DFELHASHGD GRSVLQVLEG VRDEVSVMRP
PAYNRFPNSF AHIFAGGYAA GYYSYKWAEV LSADAFSRFE EEGVLNAETG RAFREAILAR
GGSREPMELF VDFRGREPSI DALLRHSGLT EDAAA
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