Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0098 |
Symbol | |
ID | 5193783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 103972 |
End bp | 105189 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640584539 |
Product | tryptophan synthase subunit beta |
Protein accession | YP_001265457 |
Protein GI | 148545355 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0133] Tryptophan synthase beta chain |
TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCAGT CCCAATACCG CCCCGGCCCC GACGCCAATG GCCTGTTCGG CTCGTTCGGC GGCCGCTACG TGGCCGAAAC CCTGATGCCA CTGGTGCTGG ACCTGGCCCG CGAATACGAA GCGGCCAAGG CAGACCCCAA GTTCCTTGAA GAGCTGGCTT ATTTTCAGCG CGACTACATC GGCCGCCCCA ACCCGCTGTA CTTCGCCGAG CGCCTGACCG AGCATTGCGG CGGAGCGAAG ATTTTCTTCA AGCGTGAAGA GCTCAACCAT ACCGGCGCGC ACAAGGTGAA CAACTGCATC GGCCAGGTGC TGCTGGCCAA GCGCATGGGC AAAAAGCGCC TGATCGCCGA AACCGGCGCC GGCATGCACG GTGTCGCCAC CGCCACTGTC GCCGCGCGCT TCGGCCTGCC TTGCGTGATC TACATGGGCG CCACCGACAT CGAGCGCCAG CAGGCGAACG TATTCCGCAT GAAGCTGCTG GGCGCCGAGA TCGTGCCGGT TACCGCCGGC ACCGGCACCC TGAAAGACGC CATGAACGAA GCCCTGCGTG ACTGGGTTAC CAACGTCGAA GACACCTTCT ACCTGATCGG CACCGTGGCT GGCCCACACC CGTACCCCGC CATGGTCCGC GATTTCCAGT CGATCATCGG CAAAGAGACC CGTGCCCAGT TGCAAGAGAA GGAAGGCCGT CTGCCAGACA GCCTGGTTGC CTGCGTCGGC GGCGGCTCCA ATGCCATGGG CCTGTTCCAT GAGTTCCTCG AAGAGCCGAG CGTGCAGATC ATCGGCGTTG AAGCCGGTGG CCACGGCGTA CACACCGACA AGCATGCCGC CAGCCTGAAC GGCGGCGTAC CGGGCGTATT GCACGGCAAC CGCACCTACC TGCTGCAGGA CCAAGACGGC CAGATCACCG ATGCCCACTC GATTTCCGCA GGCCTGGACT ACCCGGGCAT CGGCCCGGAG CACGCCTATC TGCATGAGGT GAAGCGCGTC GAGTACGTCA GCATCACCGA TGACGAAGCA TTGGATGCGT TCCACGCAAC CTGCCGTCTG GAAGGCATCA TTCCAGCCCT GGAAAGCTCC CACGCCTTGG CCGAAGCGAT CAAGCGCGCA CCGAAGCTGC CCAAGGACCA CCTGATGGTC GTGTGCCTGT CGGGCCGCGG CGACAAAGAC ATGCAAACCG TCATGAACCA CATGGCCGCC CAGGAGAAAC ACGCATGA
|
Protein sequence | MTQSQYRPGP DANGLFGSFG GRYVAETLMP LVLDLAREYE AAKADPKFLE ELAYFQRDYI GRPNPLYFAE RLTEHCGGAK IFFKREELNH TGAHKVNNCI GQVLLAKRMG KKRLIAETGA GMHGVATATV AARFGLPCVI YMGATDIERQ QANVFRMKLL GAEIVPVTAG TGTLKDAMNE ALRDWVTNVE DTFYLIGTVA GPHPYPAMVR DFQSIIGKET RAQLQEKEGR LPDSLVACVG GGSNAMGLFH EFLEEPSVQI IGVEAGGHGV HTDKHAASLN GGVPGVLHGN RTYLLQDQDG QITDAHSISA GLDYPGIGPE HAYLHEVKRV EYVSITDDEA LDAFHATCRL EGIIPALESS HALAEAIKRA PKLPKDHLMV VCLSGRGDKD MQTVMNHMAA QEKHA
|
| |