| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0082 |
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| Symbol | |
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| ID | 5190350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 88211 |
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| End bp | 89521 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640584523 |
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| Product | sun protein |
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| Protein accession | YP_001265441 |
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| Protein GI | 148545339 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.254701 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCAC GCCTCGCCGC CGCCCGTGCG CTTGCTGCTG TGCTCAGCGG CAAGGCTTCG
CTGAACAGCT CGCTGCCGGC GCAACTGGAC AAGGTAGATG AACGCGACCG CGGCCTGACC
CAAGACCTGG CGTTCGGCAC CGCACGCTGG CAGCCACGCC TCGACCTGCT GGCCGCACAG
CTGCTGCAAA AACCCTTCAA AGCAGCCGAT GCCGATGTTC AGGCGCTGCT GCTGGTCGGC
CTGTACCAGC TGTTCTACAC GCGCATTCCG GCCCATGCCG CCATCGGCGA GACCGTGGGC
TGTGCCGACA AACTGAAGAA GCCGTGGGCC AAGGGCCTGC TCAATGCCGT ACTGCGCCGT
GCACAGCGCG AAGGCGAGGA GCTGCTCGCC GGCATGGAGC GCGACCCGGT GGTGCGTACC
GCGCACCCGC GCTGGCTGCA AAAAGCGCTG AAAGCTTTCT GGCCAGAGCA GTGGGAAGCC
ATCTGCGCCG CCAACAATGC CCACCCACCG ATGATTCTGC GGGTCAATCG CCGTCACCAT
AGCCGCGATG CCTACCTGGC ACTGCTGGCC GAAGCCGGCA TCGGCGCCAG CGCATGCCAG
TACAGCCGGG ATGGCATCGT GCTGGCCGAA GCCTGCGACG TGCGCGGCCT GCCAGGCTTC
GCCGAAGGCT GGGTGAGCGT GCAGGACGAA GCTGCGCAGC TATCTGCCGA CCTGCTGGAA
CTGGCCCCCG GTCAACGCGT GCTCGATGCT TGCTGCGCAC CGGGCGGCAA AACCTGCCAC
CTGCTGGAGG CCGAGGCTGG CCTGGCGCAC ATGGTGGCCA TCGATCTCGA AGCCAAGCGG
CTGACCCGCG TGCGAGAAAA CCTCGACCGC CTGCAGCTGG ACGCCGAGCT GATCGCCTGC
GATGCCCGCG ACACTGCCAG CTGGTGGGAC GGCAAGCCAT TCCAGCGCAT TCTGCTCGAC
GCGCCGTGCT CGGCCACCGG CGTGATTCGC CGCCACCCGG ACATCAAGCT GACCCGCCAA
GCCGACGACA TCCCGGCTTT GGCCACGCTG CAAGGCGAGC TGCTCGATGC CCTGTGGCCG
ACCTTGGAAG TGGGCGGCAT GCTGCTATAC GCCACCTGCT CCAGCTTGCC GACCGAAAAC
ACTGAAGTGA TCAAAGCCTT CCTCGCCCGC ACCCCGGGCG CCCGTGAGCT GGACCTGGCG
ACCGAAGCCG GCCTGCGCCA GCCCCACGGC CGTCAGCTGC TGGCCCAGGA AGGCGGTCAC
GACGGTTTCT ACTATGCCAA GCTGATCAAG ATCGCCGCCT CGCGCGGATA A
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| Protein sequence | MNPRLAAARA LAAVLSGKAS LNSSLPAQLD KVDERDRGLT QDLAFGTARW QPRLDLLAAQ
LLQKPFKAAD ADVQALLLVG LYQLFYTRIP AHAAIGETVG CADKLKKPWA KGLLNAVLRR
AQREGEELLA GMERDPVVRT AHPRWLQKAL KAFWPEQWEA ICAANNAHPP MILRVNRRHH
SRDAYLALLA EAGIGASACQ YSRDGIVLAE ACDVRGLPGF AEGWVSVQDE AAQLSADLLE
LAPGQRVLDA CCAPGGKTCH LLEAEAGLAH MVAIDLEAKR LTRVRENLDR LQLDAELIAC
DARDTASWWD GKPFQRILLD APCSATGVIR RHPDIKLTRQ ADDIPALATL QGELLDALWP
TLEVGGMLLY ATCSSLPTEN TEVIKAFLAR TPGARELDLA TEAGLRQPHG RQLLAQEGGH
DGFYYAKLIK IAASRG
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