| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0073 |
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| Symbol | |
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| ID | 5191856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 78671 |
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| End bp | 80290 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640584514 |
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| Product | general substrate transporter |
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| Protein accession | YP_001265432 |
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| Protein GI | 148545330 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000648863 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0860349 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGATT ACATCCAAGA GCAGGGTGCG GCGGCCAGCA GCTCCAGCCG CCGTGAAGAA
CGCAAGATCA TTTTCGCGTC ATCCCTCGGG ACGGTTTTCG AGTGGTATGA CTTTTTTCTC
TATGGTGCGC TGGCAGCGGT CATCAGCAAG CAGTTCTTCG CTGGCGTGAA CGATACCACC
GCTTTCATCT TCGCCCTGAT GGCCTTTGCT GCGGGCTTTC TGGTGCGGCC GTTTGGCGCG
CTGGTGTTCG GCCGCCTGGG TGACATGATC GGGCGCAAGT ACACCTTCCT GGTCACCATC
GTGCTGATGG GCCTGTCCAC TTTCGCTGTG GGGTTGTTGC CCACCTACGC CAGCATCGGC
ATCGCCGCAC CGATCATCCT GGTGATCCTG CGCATGCTTC AGGGGCTGGC GCTGGGCGGT
GAGTATGGCG GTGCCGCCAC TTACGTGGCC GAGCATGCGC CGCCCGGCAA GCGTGGCTTG
CATACCGGTT TCATCCAGTC CACCGCAACG TTGGGCCTGT TGTTGTCGCT GTTGGTGGTG
CTGGGTAGCC GGTATGTCAG TGGCGACCAG TTCGAAACCT GGGGCTGGCG CTTGCCGTTC
CTGCTGTCGA TCGTGCTGCT GGCGATCTCC ACCTGGATTC GCATGAGCAT GCACGAGTCG
CCGGCATTTG TGAAAATGAA GGCTCAGGGC AAGGTCAGCA AGTCGCCCAT CCGTGAGTCA
TTCACCTCCT GGCCAAACCT GAAAGTGGTG CTTACCGCCC TGTTCAGCAT CAACGCGGGG
CAGGCTGTGA CCTTCTACAC GGCGCAGTTC TACGTTCTGT TCTTCATGAC CCAGATGCTG
AAAATGGACT CGGCTCAGGC CAACACCCTG CTCATCATCA GCGTGGTGAT TGGCGCGCCG
TTCTTCGTGT TTTTTGGCTG GTTGTCCGAC CGTATCGGCC GCAAGCCGAT CCTGATGCTC
GGCCTGTTGC TGGCCACGGT ACTGTACTTC CCACTGTTCA AGGCGCTGAG CCACTACGCC
AACCCGCAGA TCGACGCTGC CAGCCGTCAG GCGCCGATCG TGGTCACCGC CGACCCGCAA
GGCTGCACAT TCCAGTTCGA CCCAGTGGGC AAGGCTCGTT TTGACAGCCC GTGCGACAAG
GTCAAGACGT TCCTGGTCAA GCAGGGCCTG CCGTACAGCT CGGTTAGCGT GGCCGGCAGT
GAAGTGGTGG TGAACATCGG TGACAAGACC ATCAATGGCT TTGATGAAAC CGCCATGCGC
GCTGCAATCG AGCAGGCTGG TTATCCGGCC AAGGCCGACC CTGCGCAGGT CAACCAGGTA
ATGGTGGTGG TGCTGATCGT GGCGATGATC CTGATCGCGA CCATGACCTA TGGTCCGTTG
GCGGCGGTGA TGGTCGAGCT GTTCCCGACC CGCATCCGCT ACACCTCGAT GTCGCTGCCC
TACCACATTG GTAATGGCTG GTTTGGTGGT TTCCTGCCTA CCGTATCGTT TGCGCTGGTG
GTCTATACCG GGGATATCTT CTACGGGCTG TGGTACCCGG TGCTGGTGAC CGGGATCAGC
CTGGTGGTTG GGATCTTCTG TCTGAGAGAA ACCAAGGATG TAGATATCGA CAAAGTCTGA
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| Protein sequence | MSDYIQEQGA AASSSSRREE RKIIFASSLG TVFEWYDFFL YGALAAVISK QFFAGVNDTT
AFIFALMAFA AGFLVRPFGA LVFGRLGDMI GRKYTFLVTI VLMGLSTFAV GLLPTYASIG
IAAPIILVIL RMLQGLALGG EYGGAATYVA EHAPPGKRGL HTGFIQSTAT LGLLLSLLVV
LGSRYVSGDQ FETWGWRLPF LLSIVLLAIS TWIRMSMHES PAFVKMKAQG KVSKSPIRES
FTSWPNLKVV LTALFSINAG QAVTFYTAQF YVLFFMTQML KMDSAQANTL LIISVVIGAP
FFVFFGWLSD RIGRKPILML GLLLATVLYF PLFKALSHYA NPQIDAASRQ APIVVTADPQ
GCTFQFDPVG KARFDSPCDK VKTFLVKQGL PYSSVSVAGS EVVVNIGDKT INGFDETAMR
AAIEQAGYPA KADPAQVNQV MVVVLIVAMI LIATMTYGPL AAVMVELFPT RIRYTSMSLP
YHIGNGWFGG FLPTVSFALV VYTGDIFYGL WYPVLVTGIS LVVGIFCLRE TKDVDIDKV
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