Gene Pput_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0056 
Symbol 
ID5191728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp57703 
End bp58026 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content50% 
IMG OID640584497 
Producthypothetical protein 
Protein accessionYP_001265415 
Protein GI148545313 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.793416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00127332 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAGC TAATTATCGC TGCTGCACTT GTTGTTTTCT CGGTGGCTTC GCAGGCCAAC 
ACTTTCTCCG AGAGCAAGCA GCTTCAATAC ACCAAGGAAC ACCAGACCGC AGTGGCCAAG
TACGCGGAGA AAAATGGCAA GCCAATGCCA GAGATTCAGG ATTACAAATA TGGCATGAAG
ATAGACGTTG CGAAATTCGT ACGTCAGTCG CAGGACCCCC GTACCTGCCA GGTCTATCCA
CGGTTGATGA CCTTCGAGGA CTCCCAGGGC ACGCTCAAGA CTGTTCGTTA CTCGATGTAT
TCGCAATGCA TCAACAACAA GTAG
 
Protein sequence
MKKLIIAAAL VVFSVASQAN TFSESKQLQY TKEHQTAVAK YAEKNGKPMP EIQDYKYGMK 
IDVAKFVRQS QDPRTCQVYP RLMTFEDSQG TLKTVRYSMY SQCINNK