Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0055 |
Symbol | |
ID | 5191727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 55503 |
End bp | 57500 |
Gene Length | 1998 bp |
Protein Length | 665 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640584496 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_001265414 |
Protein GI | 148545312 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000377038 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGAGTT TGCTTGAACG CCCTGATGAC CAAGCCGGGC ATGAAGGTCA TAGCCATGAG CATGGCGGCA TTTTTGGAAT GAACACAGAG CTGATTTTCG CGCTGATCTG TGGTGCTCTC CTGGGTGCCG GAGCTCTCGC AGGAAAACTT GGCCTGATTG ATCGTCTGCC TCTGATTCTG TACGTGTCGG CCTACGTGTT CGGTGGATGG TTCACCACTA AGGAAGCGGT TACCAACATC CGTCAGAAAC GCTTCGAGAT CGACTCGCTG ATGCTTCTCG CCGCAGTCGG TGCCGCGAGC ATCGGCGCCT GGGCGGAGGG GGCTCTGCTG CTGTTCCTGT TCAGTCTGGG GCATTCCCTT GAAAGCTACG CGATGGGGCG GGCCAAGAAA GCGATTGAGG CACTGTCCAA GCTCGCACCA GCCACCGCGA TCGTACGCAG AGCAAATGGC ACGGTGGAGA TGCCCGTGGA GCTGCTGGTT CCCGGTGACG TTGTCATCGT GCGCCCCAAT GACCGCCTGC CGGCCGATGG TTTTGTAGTC GTAGGCTCCT CAAGTATCAA CCAGGCGCCA GTAACCGGTG AGAGCGTCCC CGTGGACAAG CAACCTGTTC CTGATGCCGA ACTCGCACGC AGCAAGCCAG ATGCAGTGGA TGCAGCCTCG AAAGTCTTCG CCGGTACCAT CAATGGCGAA ACGCTCATCG AGGTTGAGGT AACCCGGCGC TCTACGGAGA GTACCTTGGC GCGGGTCATC AAGATGGTCA GTGAAGCCGA AGTCAGGAAG TCACCGACCC AGCGATTCAC GGACCGCTTC CAACGCATAT TCGTCCCGTT GGTTTTACTG CTGGTAGTCG GGCTGCTATT TGCCGGCATT TTCCTTGACG AGCCGTTCCG TGACTCGTTC TACCGGGCGA TGGCCGTACT GGTTGCAGCC AGCCCCTGCG CGCTCGCGAT CGCTACACCA AGCGCCATTC TCTCTGGCAT CGCCAGGGCA GCCCGAGGTG GCGTGCTGAT CAAGGGCGGT GCGCCACTTG AAGAGCTTGG ATCATTGAAT GCCATGGCAT TCGACAAGAC CGGTACCCTG ACCGAAGGGC GCCCACGTAT CACCGATGTA ATACCCATAG GCGGCACGCA GATCGAGGAT CTGCTAAACG TCGCCATCGC TGTGGAGTCG ATGAGCGACC ATCCGCTGGC TGCGGCAATT GTGCGTGACG GTGAAGAGAT GATTGGCACA CGGCGCCGAT TCCAAGCCAA GAACATGAGC AACATGATTG GCCGCGGCGT GCGTGCTGAG CTTGATGGGC AGTTCGTCTG GATTGGCAAG GTCGAGATGT TCGGTACCAA TGGTATTCCC GCACTCAGCA AGGCAGCCCT GGAGGCTGCG GAGCGTCTAC GTCAGTCAGG CCGTACCACC ATGGTGGTAC GGCGTGCTGA CAAGGATCTG GGCGCTATCG GGCTATTGGA CACACCCCGG GAGGGGGCCA AAGAGGCACT CCAGAAGCTT AGAGAGATGG GCATCGAACG CATGGTCATG ATTTCTGGAG ACCACAACCG CGTTGCAGAG GCTGTAGCCA AACAAGTTGG CTTAGATGAA GCGTGGGGAG ACCTGATGCC GGAAGACAAG GTCAAGGCCA TCAAAAACCT GCGCCTTAGC GCCAAGGTGG CCATGGTGGG TGACGGCGTC AATGATGCCC CTGCCATGGC CAGTTCGAGC GTTGGTATCG CAATGGGGGC TGCTGGATCT GATGTTGCCC TGGAAACGGC TGATATCGCG CTTATGGCTG ACGACATCAG GCAACTCCCA TTTGCGGTGG GGCTGAGCCG TCACACGCGA TCGATCATCC ACCAGAATCT GTTCGTCAGC TTGGGGATTG TGGCCATCCT GGTTCCGTCC ACCATCATGG GCTTGAGCAT TGGTGCCGCT GTTGCGATCC ATGAGGGCTC CACACTGTTG GTCGTCTTCA ACGCCTTGCG CCTGTTGGCC TACCGCAGAA GCACCTGA
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Protein sequence | MKSLLERPDD QAGHEGHSHE HGGIFGMNTE LIFALICGAL LGAGALAGKL GLIDRLPLIL YVSAYVFGGW FTTKEAVTNI RQKRFEIDSL MLLAAVGAAS IGAWAEGALL LFLFSLGHSL ESYAMGRAKK AIEALSKLAP ATAIVRRANG TVEMPVELLV PGDVVIVRPN DRLPADGFVV VGSSSINQAP VTGESVPVDK QPVPDAELAR SKPDAVDAAS KVFAGTINGE TLIEVEVTRR STESTLARVI KMVSEAEVRK SPTQRFTDRF QRIFVPLVLL LVVGLLFAGI FLDEPFRDSF YRAMAVLVAA SPCALAIATP SAILSGIARA ARGGVLIKGG APLEELGSLN AMAFDKTGTL TEGRPRITDV IPIGGTQIED LLNVAIAVES MSDHPLAAAI VRDGEEMIGT RRRFQAKNMS NMIGRGVRAE LDGQFVWIGK VEMFGTNGIP ALSKAALEAA ERLRQSGRTT MVVRRADKDL GAIGLLDTPR EGAKEALQKL REMGIERMVM ISGDHNRVAE AVAKQVGLDE AWGDLMPEDK VKAIKNLRLS AKVAMVGDGV NDAPAMASSS VGIAMGAAGS DVALETADIA LMADDIRQLP FAVGLSRHTR SIIHQNLFVS LGIVAILVPS TIMGLSIGAA VAIHEGSTLL VVFNALRLLA YRRST
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