Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0053 |
Symbol | |
ID | 5191784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 54033 |
End bp | 55058 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640584494 |
Product | hypothetical protein |
Protein accession | YP_001265412 |
Protein GI | 148545310 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.754892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000760343 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTGCAA AAAAGCTGCT TCAACCTCTC GCTGCTCAGC TGCACGCCTC GTTCTCGGCT TCTGGCCGCC CGTACTCTCA TCTGCACCTC CACCAGCTGT TCCACGCGGC CATCGGCTCC GTTGCACCGC AAGTTGCCAT CCAAGACAAG CTGCCAATTC AGGTCTGTCG TGACAACGAG ACACGGCAGT ACAACCTCTA CGCGGCGGTC GAGCGGGCGA AAACGTGCTT AGGATTGACC GATCTTCAAG CAGTCGGTGT GGCTGAAGAA GTCATTGAGG TGCTACGAAC TGCGGGAATC GGCGTGAACC AGGTTCGCCT GCTCCTTGAC CCCTCCTTCA GCTCGAAGAC TCGCAAAAAG GCCTTCAAGG CTCTCTGCAA GAACCTGGAT CTGAACGAGC TAGGCGATCG CTTCGTCCCC AAGACTGCCA CGTTGGCCAT CGCTGCTGGT ATTGCGCCGC CTCCCAAAAT GTCGTGGAAG GATCGCTTCG CCCTGGCTGC AAATTCCCCC ATGCGGGGGC CAAGCGAGCT CATCAGCATG GTCAACCGGG ATGAGTGTTA TCTGTGGGTA TTCCCACCGA CTGACCATCA TGCGACGGCT CCAGCGACGC ATGACCGTTT CTTTGGTGAA AAGACCCACC CGAGCGCAGA AATGGGCATG GGGTTCAGCA TCATCGATTC CGGCTGGACC CGCCCCAAGT ACCCGCTATC CAGGCAGTCA CAAGAGACCT TCATCCAGTA TTCGCTTTCT GCGCCGATGT GGTCCTGGCG CGCACAAAGT GACACCTGGC GCCTGGGAAA CATCCTGCGT TCAAGAATCC TTGACGGGGC TCCTTGGCAT AACGAGCCTC TGAGTGACGT GCTTCCGAGC GGCCTTAAAT CCCTGCCCCG GATCTATGGG TGCGAAACCT GCCGAACGCT GTTCATTGAG AATCACAGCG ACTACCCGGA TGTACCCACT CAGTGCCAAT GCGGTGAGGC GAGCAGCACG GGTGACCAAA ACGAGTCATC TGCTCTCAAT AGCTGA
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Protein sequence | MSAKKLLQPL AAQLHASFSA SGRPYSHLHL HQLFHAAIGS VAPQVAIQDK LPIQVCRDNE TRQYNLYAAV ERAKTCLGLT DLQAVGVAEE VIEVLRTAGI GVNQVRLLLD PSFSSKTRKK AFKALCKNLD LNELGDRFVP KTATLAIAAG IAPPPKMSWK DRFALAANSP MRGPSELISM VNRDECYLWV FPPTDHHATA PATHDRFFGE KTHPSAEMGM GFSIIDSGWT RPKYPLSRQS QETFIQYSLS APMWSWRAQS DTWRLGNILR SRILDGAPWH NEPLSDVLPS GLKSLPRIYG CETCRTLFIE NHSDYPDVPT QCQCGEASST GDQNESSALN S
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