| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0047 |
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| Symbol | |
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| ID | 5192807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 48174 |
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| End bp | 49628 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640584488 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001265406 |
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| Protein GI | 148545304 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.247457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000148849 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGAACC TGAAGAACGA GAGGACGCTG TGGTGGGTCC TGGGTTCGAT TTTGCTATTG
CGTTTGGTGG GGCTGGGCAT CTACCCGCTG ATGGACACAT CTGAGGCCCG TTACGCTGAA
ATGGCTCGCA AGATGGTCGA GTTGAATGAC TGGATCACGC CCATGTTCGA CTACGGGGTA
CCGTTCTGGG GCAAGCCTCC GTTGTCCTTC TGGACCCAGG CCGCGAGCAT GACGGTCTTC
GGCGTTAACG AGTTCGCTGC GCGCTTCCCA GCGTGGCTAC TCCACCTGGC AAGCTGTTTC
ATCATCATCA AACTCGGCAC GCAGCAGATT TCTCGTAACG CCGGCATCTG GGCTGCCATT
ATTTTTTCCA GCACCACACT TGGCCTGGTC TCCAGCGGTG TTGTGCTGAC TGACCCTGTT
TTGTCGTTCT CGATTCTGCT GGCCAGCTAC GGTTTCTGGC GTTGGATGAA GTGCGCCAGC
AAGGCGGATG CCTACCTGAT GTTCGCAGGT CTCGGGCTGG GCTTGCTTGC CAAAGGGCCG
CTGACCCTGG TGCTTATGGG GGCGCCGGCA TTCGCCTGGT TCGTTATCTA CAAGGAATGG
GGACGGGTAC TGAGGCTTCC CTGGATTAGC GGCCTTGTAC TCATGTTCGG TATATCCGTG
CCATGGTATG TCGCGGCCGA GATGAAAACG CCCGGCTTCA TGGAGTACTT CTTCGTTGGT
GAGCACTGGA GCCGCTACGT CGTCAGTAAC TGGGCAGGGG ACCTCTATGG TAGTGCTCAT
GCCAAGCCGT ACGGCAGCAT CTGGATCCAG CTCGGATTGT CGCTACTGCC ATGGGCCTTG
TTTCTACCAC TGTTGATCCG CAAGCGTGGA TCGATGCAGC GCTTCAAAGC CTACCTCTGG
CTGTGGGCCT TGGCGACACC GGTCTTCTTC ACATTTGCAG GCAACATTCT GTGGACCTAC
CTGCTACCCG CGCTGCCAGC GTGGGCATTG CTGCTGTCTG CACGGGTCAG CGAAGTTGGC
CCGAAGACCA CCTGGGCTGC CGCTGCGAGC GCATTGGTGT TGCCAATCAT CGGTGCGGGC
ATCATCTACG CCGGGGTACT AGAGGAGCGC CCTCAGAATC AGCGGGATGT GGTTCAAGCC
TGGCTCAATG TGCAGTCTGC TCATTCCGCT CCCCTGATCT ATCCTGGCCG CCGCTCATAC
TCGTCGGAGT TTTACAGCAG CGGGAAGTCC GAGAACATCA AGGATCCTGC CAAGTGGCCG
CGGGATGGCT CGTTCTATCT GTCCAGGCGC TTGCGAGACA GCAAGGATGG TCTGCCCGCT
GATCTAGCTT GCACATCGAT CACCGAAGCG AACGCCAGCC AGCTCCTGCT GTGCCATTGG
AAACGCCCCG CACAAGGTGC CGAGGGTCTG GCCGGAGAAA GCAATGCGGA AACGCCTCGC
AAGAACGAAG GCTAA
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| Protein sequence | MLNLKNERTL WWVLGSILLL RLVGLGIYPL MDTSEARYAE MARKMVELND WITPMFDYGV
PFWGKPPLSF WTQAASMTVF GVNEFAARFP AWLLHLASCF IIIKLGTQQI SRNAGIWAAI
IFSSTTLGLV SSGVVLTDPV LSFSILLASY GFWRWMKCAS KADAYLMFAG LGLGLLAKGP
LTLVLMGAPA FAWFVIYKEW GRVLRLPWIS GLVLMFGISV PWYVAAEMKT PGFMEYFFVG
EHWSRYVVSN WAGDLYGSAH AKPYGSIWIQ LGLSLLPWAL FLPLLIRKRG SMQRFKAYLW
LWALATPVFF TFAGNILWTY LLPALPAWAL LLSARVSEVG PKTTWAAAAS ALVLPIIGAG
IIYAGVLEER PQNQRDVVQA WLNVQSAHSA PLIYPGRRSY SSEFYSSGKS ENIKDPAKWP
RDGSFYLSRR LRDSKDGLPA DLACTSITEA NASQLLLCHW KRPAQGAEGL AGESNAETPR
KNEG
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