Gene Pput_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0044 
Symbol 
ID5191676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp45540 
End bp46958 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content57% 
IMG OID640584485 
Productheavy metal sensor signal transduction histidine kinase 
Protein accessionYP_001265403 
Protein GI148545301 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000181227 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGGCCAT TCAGCCTGGC TGCAAAGCTG GGGTTAAAAG TTGGGTTGAT GAGCGCAGCG 
TTGCTGCTTC TGTTCGCCAC CTTTGGCTAT CTGATGGTAG GCAAGGCTCT GGAAAGAAAT
GCCAGAGCAG ACCTGGAAGT AAAGATGGCG GGGATGGCTC ACAACCTGTC CACCATCCCG
GACATCTCCG GCGTCAACGC GGATGCGCAT CAGCTTGTCG ATTTGGTCAT GGGCCACAAC
AACCTGTATG TGAGCATATT CGATACCTCA CAGAATCAGA CTCCCCTGCT CTCGATTGGC
TCGAAACAGG TCAATCTGGA GGTGCACAAG TTTCAGCCGG CGGCCCAGCC CAAAGAGCAC
GAATGGCGTG ATACGCAGGA CCGTCCTCTG CTGAGTGCTT CTCGAATCAT GCGTTTGGGC
GATGGAACAG AGGTCAGCGT CTATATGACC ATGGACCAGT CATCCAGTGA GGCGCTGCTC
GATGCGTTGC TGACCTGGGC CTTGATGATG TCCCCCGTCA TCCTCGCACT GATCTTGGCC
ATTGGCTGGT GGACTGTGCG CAGAGGCCTG CTACCACTGA CCAAGTTCCT CAAGATCGCC
TCGAAAATCT CAACCGAGAG CCTCGACCAT CGCCTTCCAA CTGATGGGAT GCCGGCAGAA
CTCAAAATGC TCGCCGACGG CATCAACATC ATGCTGGCTC GCCTGGATGA TGGGGTTCAG
CAGCTCTCGC AGTTTTCTGA CGACCTTGCT CACGAACTTC GAGCACCGCT TTCCAACCTG
ATGGGCAAGG CCCAGGTTGC CTTGACCAGA GAACGATCGC TTTCCGAGTA CCGGGAGGTT
CTGGAGTCGT GCACAGAAGA GCTGGACCGC ATGAGCCGCA TGGTTTCCGA CATGCTGTTC
TTGGCCCAGG TCAGTCATCC AGCATCAATG GTGGAGTTCG AATCCGTCTC CTTGGTCGAC
GAGGTTCAGC GAGTGTGCGA GCTCTTCAGC ATTTCAGCAG AAGAAGGCGA GATTCAGCTG
CAGATCTCCG GCAGTGATGA CGTGGTGCGC GGGAATCGCC TGATGGTTCA ACGTGCCGTC
TCGAATCTGG TCTCGAACGC GATCCGTTAC TGCCCTCGCG GCCGCACGGT CTACGTTAAG
GTGCAGCATA GTGCGAGCGG TACGACGTTG AGTGTCGGCA ACCCCGGCCG TGGTATTGCC
AAGGAACACC ACGCGCACTT GTTTGAGCGG TTCTACCGTG TGGACAAGAG CCGAGCACGG
AGCGAAGGCG GTACCGGTCT TGGCTTGGCC ATTGTGCAGT CGATCATGAG TCTGCACCAG
GGATCGGCGA GCGTGGAGGT GACCGAAGAA AACTTCACCT GGTTCCACCT TCACTTTCCG
GAAGCCCAGC AAATGCAGCC GGCAATGACC GCCGCTTAA
 
Protein sequence
MRPFSLAAKL GLKVGLMSAA LLLLFATFGY LMVGKALERN ARADLEVKMA GMAHNLSTIP 
DISGVNADAH QLVDLVMGHN NLYVSIFDTS QNQTPLLSIG SKQVNLEVHK FQPAAQPKEH
EWRDTQDRPL LSASRIMRLG DGTEVSVYMT MDQSSSEALL DALLTWALMM SPVILALILA
IGWWTVRRGL LPLTKFLKIA SKISTESLDH RLPTDGMPAE LKMLADGINI MLARLDDGVQ
QLSQFSDDLA HELRAPLSNL MGKAQVALTR ERSLSEYREV LESCTEELDR MSRMVSDMLF
LAQVSHPASM VEFESVSLVD EVQRVCELFS ISAEEGEIQL QISGSDDVVR GNRLMVQRAV
SNLVSNAIRY CPRGRTVYVK VQHSASGTTL SVGNPGRGIA KEHHAHLFER FYRVDKSRAR
SEGGTGLGLA IVQSIMSLHQ GSASVEVTEE NFTWFHLHFP EAQQMQPAMT AA