| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0030 |
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| Symbol | |
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| ID | 5194841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 31922 |
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| End bp | 34297 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640584472 |
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| Product | copper-translocating P-type ATPase |
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| Protein accession | YP_001265390 |
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| Protein GI | 148545288 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000836932 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACACCG AATCGTGCCA GCATGACCAT GACCATGACC ACTCGCACCC GTATGAGCAA
CCGGATGGTA GTCAGCGCGA TTTGGTATGC GGTATGACGG TGCCACCGGA TAGTCGCTAC
TTCGAGCTAT ACGAGGGAAG GACATACCGC TTCTGCAGTG AAAAGTGCCT GACGAAATTC
CGCGCAGCGC CTGTGCATTA TCTTAGCCCT CCCCAGGACC AAGAACACGC GGGCCATCTC
CACTCGGCTG CCCCGCAGCC AAGCAACGCG GCGGACGCCG AATACACTTG CCCGATGCAT
CCCCAAATCC GCCAGCGTGG GCCGGGCAGT TGCCCAATCT GTGGCATGGC CCTAGAGCCG
GTAATACCGG AGCTTGAGGA AGACGAGAAC CCGGAACTCA AGGACTTCTC CCGCCGCTTC
TGGTGGACCT TGCCCCTGAC GGTCATCGTG ACCGTGTTGG CCATGACTGC CCACCAACTC
CAATTGCTGC ATGGTGCCAC ACAGAATTGG GTGGAGTTGA TTCTGGCCAC TCCCGTGACA
CTATGGGCTG GCTGGCCGTT TTTCGTGCGT GGGGTCGCAT CGATTCGTAA TCGCAGCCCG
AATATGTGGA CCCTGATAGG TTTGGGAACG GCTGCGGCGT ACCTATACAG CGTTGCGGCC
ACAGTGTTCC CGCAGGTTTT CCCGACGACT TTCATGCAGG ATGGCCGCAT CGGTGTCTAC
TTCGAAGCGG CTGCAGTCAT CATCTCATTA ACGTTGCTCG GCCAAATGCT CGAGCTCAAG
GCGCGCTCAC AAACCTCCGC CGCCATCAAG TCGCTCCTGG GTCTTGCCCC CAAGACGGCC
CGTCGCATCG GGGCCGATGG TCAGGAGGAA GATATTCCGC TCACCCACGT GCATACGGGC
GACCACCTGC GCGTTCGCCC TGGCGAGAAG GTGCCGGTCG ACGGGGTGGT CCTGGAAGGC
GAAAGTGCTA TCGATGAATC CATGCTGACA GGCGAGCCCG TGCCAGTGAT GAAGAAAGCT
GGGGATGCAC TCATCGGTGC CACGCTGAAT ACCCACGGCA GCCTTGTGAT GGCGGCGCAG
AAGGTCGGCG CCGAGACAGT GCTCTCGCAA ATCGTGCAGA TGGTCGCGCG GGCTCAGCGC
TCGAAAGCCC CGATGCAGCG GATGGCGGAC ACCGTGGCCG GCTATTTCGT CATGGGGGTG
ATTCTGGTCG CGCTGGTCAC GCTCTTCGGC TGGGGGCTTT TCGGACCGGA GCCTGGCTGG
GTCTTCGGCC TGATCAATGC GGTCGCGGTC CTGATCATTG CCTGCCCCTG CGCGCTCGGC
CTAGCCACTC CCATGTCGAT CATGGTCGCT ACCGGGAAGG CTGCCAGCAG TGGCGTGCTC
TTCCGAGACG CCAGTGCTAT CGAGAACCTC TGCAAGATCG ACACGCTGAT CGTCGACAAG
ACCGGGACCC TCACCGAGGG CCGGCCAGTG TTTCATAGCG TGGTCGGTAC CGGGCAGTTC
ATGCCACCCG AAGTCTTGCG CCTTGCCGCC AGCCTGGACC AAGGCAGCGA GCATCCGCTG
GCACATGCGA TTGTCGATCA TGCGCGAGCG CATGGACACA GCTTGTCCAA GCCAGAGGCG
TTTGAGTCGG GCTCTGGGAT CGGTGTACGT GGCCAGGTGA ACGGCAAACG GCTGCAGCTT
GGCAACACGA CCTTGATGGA AGAGGCTGGC CTCGACACCA GTCCGTTGCG AGACCGCGCC
GAGCAGCTGC GTCTGGAAGG CATGAGTATC ATGTACTTGG CCGTCGATGG CGTGCTCGCT
GGCCTGCTAG CGGTGTCCGA TCCGGTCAAA CCCACCTCCA AGGAGGCGGT AACCCGGCTA
CAGGCAGAAG ATGTGAAGGT CATCATGGCC ACCGGCGACG GCCTGACTAC GGCACGTGCG
GTCGCGAAAC AACTCGGCAT CGAGGAAGTC CACGGAGAAG TGAAACCCGA GGACAAGGAG
CAACTGGTGG CGCTCCTGCA GGGCGATAAG CGCCGGGTTG CCATGGCAGG AGATGGGATC
AACGATGCCC CTGCGCTGGC CCGGGCTGAT GTCGGGATCG CCATGGGAAC TGGCACCGAT
GTTGCCATGA ACAGCTCCCA GTTGACGCTG GTCAAGGGCG ACCTGATGGG CATCCTGCGG
GCCAGAACAC TATCCGTGGC CACGGTGAAG AACATGCGTC AAAACTTGGG CTTCGCATTC
TTCTACAACG CTATGGGCAT ACCGCTGGCG GCAGGTTTGT TCTACCCGCT TACCGGCCAT
CTATTGTCAC CGATGATTGC GGCATTGGCC ATGAGCGTAA GTTCGGCTTC CGTGGTATTC
AACGCACTGC GGCTGAAGCG CGTAGTCACA GACTGA
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| Protein sequence | MHTESCQHDH DHDHSHPYEQ PDGSQRDLVC GMTVPPDSRY FELYEGRTYR FCSEKCLTKF
RAAPVHYLSP PQDQEHAGHL HSAAPQPSNA ADAEYTCPMH PQIRQRGPGS CPICGMALEP
VIPELEEDEN PELKDFSRRF WWTLPLTVIV TVLAMTAHQL QLLHGATQNW VELILATPVT
LWAGWPFFVR GVASIRNRSP NMWTLIGLGT AAAYLYSVAA TVFPQVFPTT FMQDGRIGVY
FEAAAVIISL TLLGQMLELK ARSQTSAAIK SLLGLAPKTA RRIGADGQEE DIPLTHVHTG
DHLRVRPGEK VPVDGVVLEG ESAIDESMLT GEPVPVMKKA GDALIGATLN THGSLVMAAQ
KVGAETVLSQ IVQMVARAQR SKAPMQRMAD TVAGYFVMGV ILVALVTLFG WGLFGPEPGW
VFGLINAVAV LIIACPCALG LATPMSIMVA TGKAASSGVL FRDASAIENL CKIDTLIVDK
TGTLTEGRPV FHSVVGTGQF MPPEVLRLAA SLDQGSEHPL AHAIVDHARA HGHSLSKPEA
FESGSGIGVR GQVNGKRLQL GNTTLMEEAG LDTSPLRDRA EQLRLEGMSI MYLAVDGVLA
GLLAVSDPVK PTSKEAVTRL QAEDVKVIMA TGDGLTTARA VAKQLGIEEV HGEVKPEDKE
QLVALLQGDK RRVAMAGDGI NDAPALARAD VGIAMGTGTD VAMNSSQLTL VKGDLMGILR
ARTLSVATVK NMRQNLGFAF FYNAMGIPLA AGLFYPLTGH LLSPMIAALA MSVSSASVVF
NALRLKRVVT D
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