| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0017 |
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| Symbol | |
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| ID | 5192317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 19361 |
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| End bp | 20038 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640584460 |
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| Product | two component heavy metal response transcriptional regulator |
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| Protein accession | YP_001265378 |
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| Protein GI | 148545276 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0468746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTAC TCGTAGCCGA AGATGAGCCA AAAATCGGGG CCTACCTGCA GCAAGGGCTG
ACGGAGGCAG GCTTTACCGT CGATCGTGTG GTCACAGGGA CCGACGCGCT GCAATACGCT
TTGAGCGAGG CGTATGACCT GCTGATTCTT GATGTAATGA TGCCGGGGCT AGACGGCTGG
GAGGTGCTGC GGATGGTACG TGCGGCAGGG AAAGAGGTCC CAGTCTTGTT TTTGACGGCC
CGTGATGGCG TGGACGATCG CGTGAAAGGG TTAGAACTCG GGGCTGACGA TTACCTGGTC
AAACCCTTTG CATTCTCGGA ACTGCTAGCG CGTGTGCGCA CTTTGCTGCG AAGAGGCAGC
AGTGGCTATG CTCAGACCAC TATGAAGATG GCTGACCTGG AGGTAGACCT GCTTAAGCGC
CGGGCCACCC GAAATGGCAA GCGGATCGAC CTCACAGCCA AGGAGTTCTC CTTACTGGAA
CTACTCATGC GCCGACGCGG CGAGGTACTG CCGAAGTCCC TGATCGCATC GCAGGTGTGG
GATATGAACT TCGACAGCGA CACTAACGTG ATCGAGGTTG CTGTTCGTAG GTTGCGGGCC
AAGATTGATG ACGATTTCGC CCCCAAGCTC ATACATACAG TTCGTGGCAT GGGCTATCTG
ATGGATGTTC CCGAGTAA
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| Protein sequence | MKLLVAEDEP KIGAYLQQGL TEAGFTVDRV VTGTDALQYA LSEAYDLLIL DVMMPGLDGW
EVLRMVRAAG KEVPVLFLTA RDGVDDRVKG LELGADDYLV KPFAFSELLA RVRTLLRRGS
SGYAQTTMKM ADLEVDLLKR RATRNGKRID LTAKEFSLLE LLMRRRGEVL PKSLIASQVW
DMNFDSDTNV IEVAVRRLRA KIDDDFAPKL IHTVRGMGYL MDVPE
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