| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0015 |
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| Symbol | |
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| ID | 5192385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 16847 |
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| End bp | 18862 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640584458 |
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| Product | CopA family copper resistance protein |
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| Protein accession | YP_001265376 |
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| Protein GI | 148545274 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01480] copper-resistance protein, CopA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.156592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0651456 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCGG ATCCCGCAGT CTGGATATCA GCGATCTACC TGATTGGACG CAACGGCATG
CAAAGCAAAA CCACGAGACG TTCATTCGTC AAAGGCCTGG CTGCTACCGG ACTACTGGGT
GGGCTGGGCA TGTGGCGCGC GCCGGTCTGG GCCGTAACCA GCCCTGGCCA GCCTAACGTA
CTGACCGGCA CCGATTTTGA CCTGTACATC GGGGAGCTCC CGGTGAACAT TACCGGGGCA
GCTCGAACGG CGATGGCCAT CAACGGTTCG CTGCCAGGAC CAATACTCCG TTGGCGCGAA
GGCGACACGG TCACGCTACG GGTTCGCAAC CGCTTGAAGC AGGACACGTC CATCCACTGG
CACGGCATCA TCCTGCCGGC GAATATGGAC GGCGTGCCGG GTCTAAGCTT CCATGGCATC
GCTCCCGACG GCATGTACGA GTACAAGTTC AAGGTCCACC AGAACGGCAC CTACTGGTAC
CACAGCCATT CGGGCTTCCA GGAGCAGGTC GGTGTTTACG GTGCGCTGGT GATTGATGCC
AAGGATCCAG AGCCTTTCAC CTACGATCGT GACTATGTCG TCATGCTGAG TGATTGGACC
GACGAAGACC CGGCGCGGGT TATGTCCAAG CTCAAAAAAC AGTCGGACTA TTACAACTTC
CACAAGCGCA CCGTTGGCGA CTTCGTCGAC GACGTGAGCG AGAAAGGTTG GTCTGCTGCT
GTGGCCGATC GAAAGATGTG GGCCGAGATG AAGATGAGCC CAACCGATCT CGCTGACGTG
AGCGGGCACA CCTACACCTA CCTCATGAAC GGCCAGGCGC CAAATGGGAA CTGGACGGGA
ATCTTCAAGC CAGGGGAGAA AATCCGGCTT CGCTTTATCA ATGGCTCGGC GATGACCTAT
TTCGACGTGC GGATCCCCGG CTTGAAAATG ACGGTTGTCG CAGCCGACGG TCAGTACGTT
AAGCCAGTGT CGATCGATGA ATTCCGGATT GCCGTTGCTG AAACCTACGA TGTCATTGTC
GAGCCTGAAA ACGAGCAGGC TTACACCATC TTTGCTCAAT CCATGGATCG CACCGGCTAT
TCAAGGGGTA CCTTGGCTGT CCGTGAGGGC CTGCAGGCAC CGGTGCCGGC TGTAGATCCA
AGGCCTCTCA TCTCCATGAG TGATATGGGG ATGGACCACG GCAGCATGGG TGGCATGGAT
CACGGCAGCA TGGCCGGTAT GGACCACAGC AAGATGGCTG GCATGGACCA CGGCAGCATG
GCCGGTATGG ACCATAGCAA GATGGCTGGC ATGGACCACG GCAGCATGGC CGGTATGGAC
CATAGCAAGA TGGCTGGCAT GGACCACGGC AGCATGGCCG GTATGGACCA TAGCAAGATG
GCTGGCATGG ACCACGGCAG CATGGCCGGT ATGGACCATA GCAAGATGGC TGGCATGGAC
CACGGCAACA TGACCGGTAT GGACCAAAGC AATATGGCCG CCAGCGGTGC CATGCAGAAC
CATCCCGCCT CCGAAACAAA CAACCCTCTG GTCGATATGC AGACCATGAC CCCTACGCCA
AAGCTGAGCG ATCCGGGGAT CGGGCTTCGC GATAACGGGC GTCGGGTTCT CACGTATTCG
GATTTGCGTA GCACCTTCAT CGACCCTGAC GGCCGGGAAC CTGGCCGGAC AATCGAACTG
CACCTTACCG GGCATATGGA AAAGTTCGCT TGGTCCTTCG ATGGGATCAA GTTTTCTGAC
GCAGAGCCGC TGCGGCTCAA GTACGGCGAG CGCCTGCGTA TTACCTTGGT CAACGACACC
ATGATGACTC ACCCCATCCA TCTGCACGGC ATGTGGAGTG ACCTGGAGGA TGAGGACGGC
AATTTCATGG TGCGAAAACA CACGATCGAT ATGCCGCCTG GCTCGAAACG AAGCTATCGC
GTAACCGCAG ATGCACTCGG GCGCTGGGCC TATCACTGTC ACCTCATGTA CCACATGGAG
ATGGGCATGT TCCGAGAAGT CCGCGTGGAC GAATGA
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| Protein sequence | MAADPAVWIS AIYLIGRNGM QSKTTRRSFV KGLAATGLLG GLGMWRAPVW AVTSPGQPNV
LTGTDFDLYI GELPVNITGA ARTAMAINGS LPGPILRWRE GDTVTLRVRN RLKQDTSIHW
HGIILPANMD GVPGLSFHGI APDGMYEYKF KVHQNGTYWY HSHSGFQEQV GVYGALVIDA
KDPEPFTYDR DYVVMLSDWT DEDPARVMSK LKKQSDYYNF HKRTVGDFVD DVSEKGWSAA
VADRKMWAEM KMSPTDLADV SGHTYTYLMN GQAPNGNWTG IFKPGEKIRL RFINGSAMTY
FDVRIPGLKM TVVAADGQYV KPVSIDEFRI AVAETYDVIV EPENEQAYTI FAQSMDRTGY
SRGTLAVREG LQAPVPAVDP RPLISMSDMG MDHGSMGGMD HGSMAGMDHS KMAGMDHGSM
AGMDHSKMAG MDHGSMAGMD HSKMAGMDHG SMAGMDHSKM AGMDHGSMAG MDHSKMAGMD
HGNMTGMDQS NMAASGAMQN HPASETNNPL VDMQTMTPTP KLSDPGIGLR DNGRRVLTYS
DLRSTFIDPD GREPGRTIEL HLTGHMEKFA WSFDGIKFSD AEPLRLKYGE RLRITLVNDT
MMTHPIHLHG MWSDLEDEDG NFMVRKHTID MPPGSKRSYR VTADALGRWA YHCHLMYHME
MGMFREVRVD E
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