| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0009 |
|---|
| Symbol | |
|---|
| ID | 5193464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 13009 |
|---|
| End bp | 13368 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640584452 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001265370 |
|---|
| Protein GI | 148545268 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.000754026 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.103636 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGTC TCGCTGAATT CCGCCTGCTC GAACAACAGC TCGCAGCCCA ACTGGCGGAG
CTGGAAGCGC TGAAAAATGA CTCTGCCCTG AAGCAGGAAA TGGAATTTGA AACGAAGCTG
CGCAGTTTGC TCAACGAGTA TGGCTACGGC CTGCGCCAAG TGGTGCTGAT CCTCGATCCG
CAAGCGGTGG CTTCCACTGA TATGGCCCCA AAAACCTCTC GGAAACCACG CGAAGTGAAG
GTCTACAAGA ATCCACACAG CGGAGAGGTT GTTGAGACCA AGGGTGGTAA TCAGCGTACG
CTTAAGGCCT GGAAAAACGA GTATGGCGCT GAGGTAGTCG AGTCTTGGCT CGCCAATTGA
|
|---|
| Protein sequence | MSRLAEFRLL EQQLAAQLAE LEALKNDSAL KQEMEFETKL RSLLNEYGYG LRQVVLILDP
QAVASTDMAP KTSRKPREVK VYKNPHSGEV VETKGGNQRT LKAWKNEYGA EVVESWLAN
|
|---|
| |