| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0002 |
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| Symbol | |
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| ID | 5190870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1943 |
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| End bp | 3046 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640584445 |
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| Product | DNA polymerase III subunit beta |
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| Protein accession | YP_001265363 |
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| Protein GI | 148545261 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.123405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0743731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTTCA CCATTCAACG CGAAGCCCTG TTGAAACCCC TGCAACTGGT CGCCGGTGTC
GTCGAGCGCC GTCAGACCTT GCCGGTCCTG TCCAACGTAT TGCTGGTCGT ACAAGGCCAG
CAACTGTCGT TGACCGGTAC CGACCTGGAA GTCGAGCTGG TAGGCCGCGT GCAACTGGAA
GAGCCGGCCG AGCCTGGCGA GATCACTGTT CCGGCGCGCA AGCTGATGGA CATCTGCAAA
AGCCTGCCTA ACGACGCCCT GATCGATATC AAGGTCGATG AGCAGAAATT GTTGGTAAAG
GCCGGCCGCA GCCGCTTCAC CCTGTCGACC CTGCCTGCCA ATGACTTCCC GACTGTGGAA
GAAGGCCCGG GTTCGCTGAC CTGCAACCTG GAGCAGAGCA AGCTGCGCCG CCTGATCGAG
CGAACCAGCT TCGCCATGGC CCAGCAGGAT GTGCGCTATT ACCTCAACGG CATGCTGCTT
GAGGTTTCCC GCAACACGTT GCGGGCCGTA TCCACCGACG GTCACCGCTT GGCGCTTTGC
TCGATGAGCG CGCCGATCGA GCAGGAGGAT CGACACCAGG TCATCGTGCC GCGTAAAGGT
ATCCTGGAGT TGGCGCGCCT GCTGACCGAT CCTGAAGGTA TGGTCAGCAT CGTGCTGGGC
CAGCATCACA TCCGCGCCAC TACTGGCGAG TTCACCTTTA CCTCCAAGCT GGTGGACGGC
AAGTTCCCGG ACTACGAGCG CGTACTGCCC AAAGGCGGTG ACAAGCTGGT TGTCGGAGAC
CGCCAGGCGC TGCGTGAAGC TTTCAGCCGT ACTGCGATTC TTTCCAACGA AAAGTACCGC
GGTATTCGCC TGCAACTGGC TGCCGGTCAA CTGAAGATCC AGGCTAACAA CCCTGAGCAG
GAAGAAGCTG AAGAAGAAAT CAGCGTGGAC TACGAAGGTA GCTCGCTGGA GATTGGTTTC
AACGTCAGCT ACTTGCTGGA CGTGCTGGGC GTGATGACTA CTGAGCAAGT TCGTCTGATC
TTGTCCGATT CAAACAGCAG TGCGCTGCTG CAGGAAGCTG GCAATGACGA TTCTTCCTAC
GTTGTCATGC CGATGCGCCT GTAA
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| Protein sequence | MHFTIQREAL LKPLQLVAGV VERRQTLPVL SNVLLVVQGQ QLSLTGTDLE VELVGRVQLE
EPAEPGEITV PARKLMDICK SLPNDALIDI KVDEQKLLVK AGRSRFTLST LPANDFPTVE
EGPGSLTCNL EQSKLRRLIE RTSFAMAQQD VRYYLNGMLL EVSRNTLRAV STDGHRLALC
SMSAPIEQED RHQVIVPRKG ILELARLLTD PEGMVSIVLG QHHIRATTGE FTFTSKLVDG
KFPDYERVLP KGGDKLVVGD RQALREAFSR TAILSNEKYR GIRLQLAAGQ LKIQANNPEQ
EEAEEEISVD YEGSSLEIGF NVSYLLDVLG VMTTEQVRLI LSDSNSSALL QEAGNDDSSY
VVMPMRL
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