| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0001 |
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| Symbol | dnaA |
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| ID | 5194200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 385 |
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| End bp | 1902 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640584444 |
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| Product | chromosomal replication initiation protein |
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| Protein accession | YP_001265362 |
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| Protein GI | 148545260 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.390724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0464489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGTGG AACTTTGGCA GCAGTGCGTG GAGCTTCTGC GCGATGAACT GCCTGCCCAG
CAATTCAACA CCTGGATCCG TCCGCTACAG GTCGAAGCCG AAGGCGACGA GTTGCGCGTC
TATGCGCCTA ACCGTTTCGT TCTCGATTGG GTCAATGAAA AGTACCTGGG TCGTTTGCTC
GAGCTGTTGG GTGAGAACGG TAGCGGCATT GCACCAGCCC TTTCCTTATT AATAGGTAGC
CGCCGCAGCT CGGCCCCAAG GGCTGCACCC AACGCGCCGG TCAGCGCTGC CGTTGCGGCT
TCGCTGGCGC AGACTCAGGC GCACAAGACG GCCCCGGCAG CAGCGGTTGA ACCCGTTGCC
GTGGCCGCGG CCGAGCCTGT ATTGGTCGAG ACGTCTTCGC GTGACAGCTT TGATGCCATG
GCCGAGCCTG CTGCTGCGCC GCCCAGTGGT GGCCGGGCTG AACAGCGCAC CGTGCAGGTT
GAAGGTGCGC TCAAGCACAC CAGTTACCTG AACCGGACCT TTACCTTTGA CACCTTCGTC
GAAGGTAAGT CGAACCAGCT CGCCCGCGCG GCTGCCTGGC AGGTTGCGGA CAACCCTAAG
CATGGCTACA ACCCACTGTT CCTTTATGGC GGTGTGGGTT TGGGTAAAAC CCACCTTATG
CATGCTGTGG GTAACCATCT GCTGAAGAAG AATCCGAACG CCAAGGTGGT GTACCTGCAT
TCGGAGCGCT TCGTCGCGGA CATGGTCAAA GCGTTGCAAC TCAACGCCAT CAACGAATTC
AAGCGCTTCT ACCGCTCGGT GGACGCGTTG CTGATCGACG ATATCCAGTT CTTCGCTCGC
AAAGAGCGCT CGCAAGAAGA GTTTTTCCAC ACCTTCAACG CCTTGCTTGA GGGTGGCCAG
CAGGTAATCC TTACCTCTGA CCGCTATCCC AAGGAAATCG AAGGCCTGGA AGAGCGTCTG
AAGTCGCGCT TTGGTTGGGG CCTGACGGTG GCTGTCGAGC CGCCAGAGCT GGAGACCCGC
GTAGCGATCC TGATGAAGAA GGCCGACCAG GCCAAAGTCG AGCTCCCGCA TGACGCAGCC
TTTTTCATCG CTCAGCGCAT CCGGTCCAAC GTCCGTGAGC TGGAAGGTGC ACTGAAGCGA
GTTATTGCTC ACTCGCACTT CATGGGGCGT GACATCACCA TCGAGCTGAT TCGTGAATCG
CTCAAGGATC TGTTGGCGCT GCAAGACAAA CTGGTCAGTG TGGATAACAT TCAGCGTACC
GTCGCTGAGT ACTACAAGAT CAAGATCTCC GATCTGTTGT CCAAGCGTCG TTCGCGTTCT
GTCGCGCGCC CGCGTCAGGT AGCCATGGCC CTGTCCAAGG AGTTGACCAA CCACAGTCTG
CCGGAAATCG GCGACATGTT CGGTGGTCGC GACCATACGA CCGTGCTGCA CGCCTGCCGC
AAAATCAATG AACTGAAGGA ATCCGACGCG GACATCCGCG AGGACTACAA GAACCTGCTG
CGGACGCTGA CGACCTGA
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| Protein sequence | MSVELWQQCV ELLRDELPAQ QFNTWIRPLQ VEAEGDELRV YAPNRFVLDW VNEKYLGRLL
ELLGENGSGI APALSLLIGS RRSSAPRAAP NAPVSAAVAA SLAQTQAHKT APAAAVEPVA
VAAAEPVLVE TSSRDSFDAM AEPAAAPPSG GRAEQRTVQV EGALKHTSYL NRTFTFDTFV
EGKSNQLARA AAWQVADNPK HGYNPLFLYG GVGLGKTHLM HAVGNHLLKK NPNAKVVYLH
SERFVADMVK ALQLNAINEF KRFYRSVDAL LIDDIQFFAR KERSQEEFFH TFNALLEGGQ
QVILTSDRYP KEIEGLEERL KSRFGWGLTV AVEPPELETR VAILMKKADQ AKVELPHDAA
FFIAQRIRSN VRELEGALKR VIAHSHFMGR DITIELIRES LKDLLALQDK LVSVDNIQRT
VAEYYKIKIS DLLSKRRSRS VARPRQVAMA LSKELTNHSL PEIGDMFGGR DHTTVLHACR
KINELKESDA DIREDYKNLL RTLTT
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