Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4885 |
Symbol | |
ID | 5200209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 5380919 |
End bp | 5381731 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640584442 |
Product | formamidopyrimidine-DNA glycosylase |
Protein accession | YP_001265360 |
Protein GI | 148557778 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.512414 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAGC TTCCCGAAGT AGAAACCACC GTCCGCGGTC TGCGTCCCCC GCTCGAGGGG CGGCGTCTGA CCCGGGTCGA GACCCGCCGC GCCGACCTGC GGCGCCCCTT TCCGGCCGAC CTGCGCCAGC GGATGACCGG GGCGACGATC ACCGGGCTCG GCCGCCGCGC CAAATATGGC CTGATCGAGA CCGATCGCGG CGACGTGATG GTCTTCCACC TCGGCATGTC GGGCCGCTGG CGGATCGACC CGAGCGAGAT CGGCGCGCAC GATCATCTGG TGCTGGAGAC CGACGAGGGG CGGACGCTGT CGCTGTGCGA CCCGCGCCGC TTCGGATCGG TCGACCTCGT CCGGGGCGAG GAACTCGCCG GGTTCGGCCC GTTCAAGGCG CTGGGGCCCG AGCCGCTGGG CCCCGATCTG ACCGGCGCCC ATCTCGCCGG GGCGCTCGAA GGGCGCGTCG CGCCGATCAA GGCGATGCTG CTCGACCAGC GGATCGTCGC CGGGCTCGGC AACATCTATG TGTGCGAGGC GCTGCACATG ACCGGCATCG CGCCGACCAC CATGGCGGGC CGGATCGCGA AGAAGCGGCT CGACCGGCTG GTCGATTCGA TTCGCGAGGT GCTGGCGGCG GCGATCGAGG CGGGCGGCTC CACGCTGCGC GACTATGCCC GGCCCGATGG CGAGCTCGGC TATTTCGCCA AGCAGTGGCG CGTCTATGGC CGCGAAGGCG AGCCGTGCCA TTGCGGCACC GTGATCCGGC GCCGCGTCGA TGGCGGCCGA TCGACCTTCT ACTGCCCCAA ATGCCAGAAA TAG
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Protein sequence | MPELPEVETT VRGLRPPLEG RRLTRVETRR ADLRRPFPAD LRQRMTGATI TGLGRRAKYG LIETDRGDVM VFHLGMSGRW RIDPSEIGAH DHLVLETDEG RTLSLCDPRR FGSVDLVRGE ELAGFGPFKA LGPEPLGPDL TGAHLAGALE GRVAPIKAML LDQRIVAGLG NIYVCEALHM TGIAPTTMAG RIAKKRLDRL VDSIREVLAA AIEAGGSTLR DYARPDGELG YFAKQWRVYG REGEPCHCGT VIRRRVDGGR STFYCPKCQK
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