| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4884 |
|---|
| Symbol | |
|---|
| ID | 5200208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 5379968 |
|---|
| End bp | 5380750 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640584441 |
|---|
| Product | ubiquinone/menaquinone biosynthesis methyltransferase |
|---|
| Protein accession | YP_001265359 |
|---|
| Protein GI | 148557777 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.321775 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCG AGAGTTTGCG GGCGCGGCAT CCTGTCGCTA GAGCGTCGCG CATGAGCGAC
ACCGTTTCCT TCGGCTATGC CGACGTCTCC CCCGACGAGA AGACCGCCAA GGTCGGCGAG
GTCTTCCGCA GCGTCGCGAG CCGCTACGAC CTGATGAACG ACGCCATGTC GGGCGGGATG
CACCGGCTGT GGAAGGATCG CTTCGTCCGC CGGGTGAAGC CGCGCGCCGG GGAGGTCATC
CTCGACATGG CGGGTGGCAC CGGCGACATC GCCTTCCGCC TCGCCCGCTC GGGCGCCGCC
GTCACCGTTT CCGACATCAA CGCCGCGATG CTCGAGGTCG GCAAGGAGCG CGCCGCGAAG
AAGCGGATCG AGGGCCTGTC CTGGTCCGAG CAGAACGCCG AGACGCTGAG CTTCGAAGCG
AACCGGTTCG ACGCCTATAC GATCGCCTTC GGCATCCGCA ACGTCACCCA TCGGATGCAA
GCGCTGAAGG AGGCGCATCG CGTGCTGAAG CGTGGCGGGC GCTTCTACTG CCTCGAATTC
TCGACGACGC TGTGGCCGGG CTTCAAGGAA GCCTATGACG CCTATTCGCA CCGGCTGGTC
CCCAAGATCG GCAAGATGCT GGCCGGCGAC GAGGAAAGCT ACCGCTACCT GATCGAATCG
ATCCGCCGCT TTCCGACGAT GGACGCCTTC AAGGCGGAGA TCGCCGAGGC CGGCTTCGTC
CAGGCGAAGG TCGAGCCGCT GCTCGGCGGC CTCGTCGCCA TTCACAGCGG CTGGAAGATT
TGA
|
|---|
| Protein sequence | MTIESLRARH PVARASRMSD TVSFGYADVS PDEKTAKVGE VFRSVASRYD LMNDAMSGGM
HRLWKDRFVR RVKPRAGEVI LDMAGGTGDI AFRLARSGAA VTVSDINAAM LEVGKERAAK
KRIEGLSWSE QNAETLSFEA NRFDAYTIAF GIRNVTHRMQ ALKEAHRVLK RGGRFYCLEF
STTLWPGFKE AYDAYSHRLV PKIGKMLAGD EESYRYLIES IRRFPTMDAF KAEIAEAGFV
QAKVEPLLGG LVAIHSGWKI
|
|---|
| |