Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4882 |
Symbol | |
ID | 5200017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 5378182 |
End bp | 5378406 |
Gene Length | 225 bp |
Protein Length | 74 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640584439 |
Product | AbrB family transcriptional regulator |
Protein accession | YP_001265357 |
Protein GI | 148557775 |
COG category | [K] Transcription |
COG ID | [COG2002] Regulators of stationary/sporulation gene expression |
TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.873264 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTCA GCAAGCTCAC GGCGAAGAAC CAGGTGACGA TCCCGGCCGA CGTCCGGCAG CAGCTCGGCG TCAAATCGGG CGATCATGTC GCCTTCGAGG TCGAAGACGG CAAGGTGATC GTGCGCAAGG CTCGCGCGAT CGATTGGGCC TGGACGGCGG CGGCCGGATC GACCTTGAGC GAATGGTCGA GCGACGCCGA CGAAGAGGCC TTCCGTGACC TTTGA
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Protein sequence | MDVSKLTAKN QVTIPADVRQ QLGVKSGDHV AFEVEDGKVI VRKARAIDWA WTAAAGSTLS EWSSDADEEA FRDL
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