Gene Swit_4882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4882 
Symbol 
ID5200017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5378182 
End bp5378406 
Gene Length225 bp 
Protein Length74 aa 
Translation table11 
GC content64% 
IMG OID640584439 
ProductAbrB family transcriptional regulator 
Protein accessionYP_001265357 
Protein GI148557775 
COG category[K] Transcription 
COG ID[COG2002] Regulators of stationary/sporulation gene expression 
TIGRFAM ID[TIGR01439] looped-hinge helix DNA binding domain, AbrB family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.873264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTCA GCAAGCTCAC GGCGAAGAAC CAGGTGACGA TCCCGGCCGA CGTCCGGCAG 
CAGCTCGGCG TCAAATCGGG CGATCATGTC GCCTTCGAGG TCGAAGACGG CAAGGTGATC
GTGCGCAAGG CTCGCGCGAT CGATTGGGCC TGGACGGCGG CGGCCGGATC GACCTTGAGC
GAATGGTCGA GCGACGCCGA CGAAGAGGCC TTCCGTGACC TTTGA
 
Protein sequence
MDVSKLTAKN QVTIPADVRQ QLGVKSGDHV AFEVEDGKVI VRKARAIDWA WTAAAGSTLS 
EWSSDADEEA FRDL