Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4869 |
Symbol | |
ID | 5197881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 5365057 |
End bp | 5366055 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640584426 |
Product | SAF domain-containing protein |
Protein accession | YP_001265344 |
Protein GI | 148557762 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.778513 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCGA GGAAGTTGCT GCTGCTGATC ATGGCGCTGG TCATGGCGGG CATCTCGGCA GTCGTGGCGC GCAGCATGTT CGGCGGCAAC AGCGAGGCCG AGGCGGCCCC CGCCGCCGCG CCCCAGCCGA GCGGCCCCGA GGTCGCCGTC GCGGTCCGCC CGCTGCCGGT CGGCACGATC ATCGGCCCGG AAAGCTTCCG CTACCAGCGC TGGCCGGCCG AGCTGGTCAG CAAGACCTAT TTCATCAAGG GCGAGAGCGA TCTCGCCGCG CTCAACGGAT CGGTCGTCCG CTACGCGATC ACCGCCGGCG CGCCGGTCAC GCAGGGCGCG CTGGTCAAGC CCGGCGATCG CGGCTTCCTG GCCGCGGCGC TCGGCCCCGG CATGCGCGCC GTCACCATCT CCGTCTCGGC CCAGTCGGGC GTCGCCGGCT TCGTCTTCCC CGGCGACCGG GTCGACCTGA TGCTGACCCA GGAGGTTCCG GGCGGGGGCG ACGGCCCGCC GCTCAAGGCC GCCGAGACGA TCATCCGCAA CATCCGCGTC CTCGCCGCCG ACCAGCGCAC CGACAAGACG GTCGACGAGG AGGGCAAGAC GGTGGTCGCC AACACGTCGA ACGTCACGCT GGAGGCGACC CCGAAGATCG CCGAGAAGAT CGCCGTCGCG CAGACGATCG GCCAGCTCTC GCTCGCGCTC CGCTCGATCG CCGACGACAG GGCCGAACTG GAGGAGCGGA TCGCCAATGG CGACATCAAG CTGCCGGCCC AGGGCGATCC CAAGGCCGAG CGCCAGATGC TGCTCGAGAT CACATCGCGC CCGATCGACA CCAACACCAC CTATACGGTC GGCGCCGACG TCTCGCGCTA CCAGCGGTCG AGCATTCCCG CCAAGGCCGG CGGCGACGCC GCCCCCGCCC CGTCGAGCGC CCCCGCCGCC CCAGCCGGCC CCGCCGTCCG CGTGGCGCGC GGCAACAACG TCACCGTCAG CACGGTCGGA GCCCGGTGA
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Protein sequence | MDARKLLLLI MALVMAGISA VVARSMFGGN SEAEAAPAAA PQPSGPEVAV AVRPLPVGTI IGPESFRYQR WPAELVSKTY FIKGESDLAA LNGSVVRYAI TAGAPVTQGA LVKPGDRGFL AAALGPGMRA VTISVSAQSG VAGFVFPGDR VDLMLTQEVP GGGDGPPLKA AETIIRNIRV LAADQRTDKT VDEEGKTVVA NTSNVTLEAT PKIAEKIAVA QTIGQLSLAL RSIADDRAEL EERIANGDIK LPAQGDPKAE RQMLLEITSR PIDTNTTYTV GADVSRYQRS SIPAKAGGDA APAPSSAPAA PAGPAVRVAR GNNVTVSTVG AR
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