| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4856 |
|---|
| Symbol | |
|---|
| ID | 5198856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 5348603 |
|---|
| End bp | 5349526 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640584413 |
|---|
| Product | GumN family protein |
|---|
| Protein accession | YP_001265331 |
|---|
| Protein GI | 148557749 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3735] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTTCT TCCGCCGCGC GCTTGCCGCA CTCCTCGCCC TCACCCTAAC GGCCCCGGCC
ACGGCCTCGC CCGCCCTGTG GAAGTTCGGC GACGCGGACA CGACGATCTA CCTGTTCGGC
ACGATCCACG CGCTGCCGCC CGGCTACAAA TGGCAGGACG CGCGGATCGA GAAGGCGATG
GCGGCGTCGG ACACGCTGGT GATCGAGACG CTGCTCGACA AGGACCCGCA GGCGATCGCC
AGCCTGTTCC CGCCGCCCGA CCCGAGCCTG CCGCCGATCC TGGAGCGGGT GCCCGAGAAG
AGCCGCCCCG CCTTCGCCGC GGTGCTCAAG AAATCGGGCC TCGACCCGGC CATGCTCAGC
CGCATGCCGA CCTGGCAGGC GAGCTTCATG CTGATGGGCG CGATGATGAA GGACCTGGGG
ATCCAGCGCG ACGCCGGCGT GGAGGACAGC CTGATGCCCG CCTTCGCCCC GCCGCCTTCC
CCCGATGCCA AGGACGCCAG CCCCCGCAAG GTCGAGGCGC TGGAGACCGC GTCCGAACAG
CTCGCCCTGT TCGCCAACCT GTCCGAGGCC GACCAGCGCG AGATGCTGGC GAGCTTCGCC
GACGGACAGG GCGACGCCAA GGAAGACTAT GCCAGGCTCC TCGCCGCCTG GGCGAGCGGC
AACGAGGCGG CGATCGCCAA GGCCTTCGCC GACGACAAGG ACCTGACCCC GCACCTGCGC
GAGATATTGC TGCGCCGGCG CAACGCCAAC TGGGCCGAAT GGCTGAAGAA GCGGCTGGCG
ACGCCGGGCA CGGTGTTCGT CGCGGTCGGC GCCGGGCATC TGGCGGGGCC TCTGTCGGTA
CAATCCATGC TCGCCGCCGA GGGCATCACC GTAGAGCGCA TCTGGAACCA GCGTGACCGC
AAGCAACGAC CCACTCGCCA CTGA
|
|---|
| Protein sequence | MSFFRRALAA LLALTLTAPA TASPALWKFG DADTTIYLFG TIHALPPGYK WQDARIEKAM
AASDTLVIET LLDKDPQAIA SLFPPPDPSL PPILERVPEK SRPAFAAVLK KSGLDPAMLS
RMPTWQASFM LMGAMMKDLG IQRDAGVEDS LMPAFAPPPS PDAKDASPRK VEALETASEQ
LALFANLSEA DQREMLASFA DGQGDAKEDY ARLLAAWASG NEAAIAKAFA DDKDLTPHLR
EILLRRRNAN WAEWLKKRLA TPGTVFVAVG AGHLAGPLSV QSMLAAEGIT VERIWNQRDR
KQRPTRH
|
|---|
| |