Gene Swit_4843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4843 
Symbol 
ID5199192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5335486 
End bp5336262 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content66% 
IMG OID640584400 
Producthypothetical protein 
Protein accessionYP_001265318 
Protein GI148557736 
COG category[S] Function unknown 
COG ID[COG3496] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.49195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATCGG CGATCTACGC GGGCACCGTC TTCCACCGCC GCTTCCGCCC GCGCGCGCAC 
AATCTGCGCT ACCGCATCTT TCAATGCCTG TTCGACCTCG ACGAGATCGA TGAGATATCA
ACACGTTGCC GGCTGTTCTC GCGCAACCGT CTCAACCTCT TCTCCTTTCA CGACCGCGAC
TATGGCGATC GTTCGGGCGC GCCGCTCAGG CCCCAGGTCG AGGCGCTGAT GCGCCGGGCG
GGGCAGGAAC CGGACGGCGG GCCGATCCGT TTGCTCACCA TGCCGCGCAT GTTCGGCCAT
GTCTTCAACC CGCTGTCGGT CTGGTTCTGC CATCGCCGCG ACGGGAGCCT CGCGACCATC
GTCTATGAGG TGACCAACAC TTTCAAGGAA CGCCACAGCT ACGTCATCCC GGTGGCGGAG
GGGCATGGGC GCGATCCGCT GATCCGCCAG GCGTGCGACA AATGCTTCTA TGTGTCGCCG
TTCATGGACA TCGACATGCG CTACGACTTC ACCGTCGAGC CGCCGATGGA GAAGACCCGC
GTGGTCGTCG CCGGCGGCGA TGCCGACGGG CCGCTGATCG TCGCCGCCTT CCAGGGCGAT
CGGCGCGAAC TGGGCGACGG CGCTTTGTTC GGCGCCTTCC TGCGCCACCC GCTGCTGACG
CTGAAGGTGG TCGCGGGCAT CCATGTCGAG GCGCTCTGGC TGCTGCTCAA GCGGATCGGC
GTCCGTCGCC ATGTCCCCGC GGGCGGCGAC GGCGTGTCGA TCGTGGCGGC GGCGTGA
 
Protein sequence
MKSAIYAGTV FHRRFRPRAH NLRYRIFQCL FDLDEIDEIS TRCRLFSRNR LNLFSFHDRD 
YGDRSGAPLR PQVEALMRRA GQEPDGGPIR LLTMPRMFGH VFNPLSVWFC HRRDGSLATI
VYEVTNTFKE RHSYVIPVAE GHGRDPLIRQ ACDKCFYVSP FMDIDMRYDF TVEPPMEKTR
VVVAGGDADG PLIVAAFQGD RRELGDGALF GAFLRHPLLT LKVVAGIHVE ALWLLLKRIG
VRRHVPAGGD GVSIVAAA