Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4843 |
Symbol | |
ID | 5199192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 5335486 |
End bp | 5336262 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640584400 |
Product | hypothetical protein |
Protein accession | YP_001265318 |
Protein GI | 148557736 |
COG category | [S] Function unknown |
COG ID | [COG3496] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.49195 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAATCGG CGATCTACGC GGGCACCGTC TTCCACCGCC GCTTCCGCCC GCGCGCGCAC AATCTGCGCT ACCGCATCTT TCAATGCCTG TTCGACCTCG ACGAGATCGA TGAGATATCA ACACGTTGCC GGCTGTTCTC GCGCAACCGT CTCAACCTCT TCTCCTTTCA CGACCGCGAC TATGGCGATC GTTCGGGCGC GCCGCTCAGG CCCCAGGTCG AGGCGCTGAT GCGCCGGGCG GGGCAGGAAC CGGACGGCGG GCCGATCCGT TTGCTCACCA TGCCGCGCAT GTTCGGCCAT GTCTTCAACC CGCTGTCGGT CTGGTTCTGC CATCGCCGCG ACGGGAGCCT CGCGACCATC GTCTATGAGG TGACCAACAC TTTCAAGGAA CGCCACAGCT ACGTCATCCC GGTGGCGGAG GGGCATGGGC GCGATCCGCT GATCCGCCAG GCGTGCGACA AATGCTTCTA TGTGTCGCCG TTCATGGACA TCGACATGCG CTACGACTTC ACCGTCGAGC CGCCGATGGA GAAGACCCGC GTGGTCGTCG CCGGCGGCGA TGCCGACGGG CCGCTGATCG TCGCCGCCTT CCAGGGCGAT CGGCGCGAAC TGGGCGACGG CGCTTTGTTC GGCGCCTTCC TGCGCCACCC GCTGCTGACG CTGAAGGTGG TCGCGGGCAT CCATGTCGAG GCGCTCTGGC TGCTGCTCAA GCGGATCGGC GTCCGTCGCC ATGTCCCCGC GGGCGGCGAC GGCGTGTCGA TCGTGGCGGC GGCGTGA
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Protein sequence | MKSAIYAGTV FHRRFRPRAH NLRYRIFQCL FDLDEIDEIS TRCRLFSRNR LNLFSFHDRD YGDRSGAPLR PQVEALMRRA GQEPDGGPIR LLTMPRMFGH VFNPLSVWFC HRRDGSLATI VYEVTNTFKE RHSYVIPVAE GHGRDPLIRQ ACDKCFYVSP FMDIDMRYDF TVEPPMEKTR VVVAGGDADG PLIVAAFQGD RRELGDGALF GAFLRHPLLT LKVVAGIHVE ALWLLLKRIG VRRHVPAGGD GVSIVAAA
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