Gene Swit_4840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4840 
Symbol 
ID5199189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5332008 
End bp5333033 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content67% 
IMG OID640584397 
Productmethyltransferase type 11 
Protein accessionYP_001265315 
Protein GI148557733 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0531482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCA TCGCCGCCGC CACAGCAGCC GTCGAACGGC TGCCGCTTCC CGACGCCGTG 
ACCCTGGCGG GGGTCGAGTT CCTCGTCGGC CGCACCGGCC GCAAGCTGGC GAAGCAGCCC
GACATCGAGG CCGCCTTCGC CCGCGACATG GACGGCTTCC CGATCGCGAT CCACACCGAC
GACGCCAATG CCCAGCATTA TGAGGTGCCG GCCGCCTTCT TCGACCTCTG CCTCGGCCCG
CGCCGCAAAT ATAGCTGCTG CTATTATGAG GGACCGCAAA CGACGATCGC CGAGGCCGAG
GAAGCCGCCC TCGCCCAGAC CGCCGAGCAT GCCGACCTGC GGGACGGGCA GGAGATATTG
GAGCTCGGCT GCGGCTGGGG CTCGCTCAGC CTGTACATGG CCGCCCGCTA TCCCAACGCG
CGGATCACCG CGGTCTCCAA TTCCCATTCG CAGCGCGAGC ATATCGAGAC GCTCGCCAGG
GCGCAGGGAT CGACCAACCT GACCGTCGTC ACCTGCGACA TGAACGATTT CCAGGCGGAC
GGCCGCTTCG ATCGGGTCGT CTCGGTCGAG ATGTTCGAGC ATATGTCGAA CTGGCGCGCG
CTGCTGACCC GGGTGAAGGG CTGGCTGAAG CCCGACGGGC TGCTGTTCAT CCACATCTTC
ACCCATGACC GGGCGAGCTA CCGCTTCGAC CATGGCGACA AGGCCGACTG GATCGCCCAG
CATTTCTTCA CCGGCGGGAT CATGCCCAGC CACGGCCTGC TCCGCCATTT CCCCGACCTG
TTCGCGGTCG AGCAGGAATG GCGCTGGAAC GGCGAGCATT ATGCCCGCAC CGCGTTCGAC
TGGCTCGCCC GCTTCGACGC CAACCAGCCG GCGATCGCCG AGATATTCCG CCAGACCTAC
GGCGCCGACG CCAGGCTGTG GGAGCGGCGC TGGCGACTGT TCTTCCTGGC GACGGCCGGG
CTGTTCGGCC ACAAGGACGG CGTCCCCTGG GCGGTCAGCC ACTATCGGCT GCGGCCGGCG
GGGTAA
 
Protein sequence
MDIIAAATAA VERLPLPDAV TLAGVEFLVG RTGRKLAKQP DIEAAFARDM DGFPIAIHTD 
DANAQHYEVP AAFFDLCLGP RRKYSCCYYE GPQTTIAEAE EAALAQTAEH ADLRDGQEIL
ELGCGWGSLS LYMAARYPNA RITAVSNSHS QREHIETLAR AQGSTNLTVV TCDMNDFQAD
GRFDRVVSVE MFEHMSNWRA LLTRVKGWLK PDGLLFIHIF THDRASYRFD HGDKADWIAQ
HFFTGGIMPS HGLLRHFPDL FAVEQEWRWN GEHYARTAFD WLARFDANQP AIAEIFRQTY
GADARLWERR WRLFFLATAG LFGHKDGVPW AVSHYRLRPA G