Gene Swit_4829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4829 
Symbol 
ID5198679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5321503 
End bp5321904 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content66% 
IMG OID640584386 
ProductDoxX family protein 
Protein accessionYP_001265304 
Protein GI148557722 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.37965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCC TCGATCAGAA CCGCCCGCTG ATGCTGAGCG TGTTGCGCAT CATGTCGGGA 
TTATTGTTCC TGGCCCATGG GACGCAGAAA TACCTCTCCT TCCCGGGCGG CGAACGCGCC
GGGTCGGGCT GGGCGCTCGA CAATCCCGCC GCTTTTGCCG GGATCGTCGA GTTCGGCGCC
GGCCTGCTCA TCGCGCTGGG GCTGTTCACG CGGCCGGCGG CGTTCCTCGC CTCGGGCACC
ATGGCGGTGG CCTATTTCAT CGGCCACATG CCGAAGAACT TCTGGCCGGT GAACAATATG
GGCGACGCGG CGATCCTCTA CTGCTTCATC TTCCTCTACC TGGTCTTCGC CGGCCCGGGG
CCGCTCAGCC TGGACGCCCT GCGCGCGCAG AAGCGCGGCT GA
 
Protein sequence
MNSLDQNRPL MLSVLRIMSG LLFLAHGTQK YLSFPGGERA GSGWALDNPA AFAGIVEFGA 
GLLIALGLFT RPAAFLASGT MAVAYFIGHM PKNFWPVNNM GDAAILYCFI FLYLVFAGPG
PLSLDALRAQ KRG