| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4827 |
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| Symbol | |
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| ID | 5199834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5315234 |
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| End bp | 5317246 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640584384 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_001265302 |
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| Protein GI | 148557720 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.501728 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAACG CCCGTAGGCC GACCTGCGCC CGATCGATCG TACTGGGTGC CATGTTATGC
GTGTCGGCCG CGGCGCAGGC GCAACCCGCG CCTCCGCCCG CCGCCTCCGA TGATCCCGCC
GAGCTTCCCG AACTCGATCC CTCGACCGAG ATGGCGCCGC TGCCGGGCAT GGAGGTCGAC
TGGCCCGAGG CGGCCGATAC CGCGGGCGAG CAACCTGCCG ACGCCGGCGC CGCGACCGGC
GCCACGGCGG AATCGACGCT TTCCGATGCG CAGGCCGACC GGCGCTACGG CGTCGACATC
ACCGGCCTTT CGGGCAAGGA CGGGGTGGCG CCCGAGACCG AGAGCGCGAT CCGTTCCCGT
TTCCGCCAGC TCTCCGCGCT GGAGGAAGGC AAGGGCGCCG GCAACACCGC GCAGATCGAC
CGGCGCGCCC GGCAGGACGA GGCGCTGCTC AACGAGCTGC TGCGCGCCGC CGGCTATTAT
GACGCGCGCG TCTCGACCCG GATCGAGGAT GAGAAGACCG GCCGGCTCGG CGTCTCCCTC
GTCGTCCGGC CCGGCGAGCT CTACACGCTG TCGGGGATCG ATTTCGGCGG GATCGATGCG
GCCGGCGACG TCGCCGCGCA ACTTCGCCGC GCCTTCGGGC TCGAAGCCGG CCAGCCGGCC
GATTCGGACC GGATCGAGGC GGGGCTGGGC GCGCTCAAGG CTGAGCTCGG GCATGAGGGC
TTCGTCTTCG CCAAGATAGG CGAGCCCAAG CTCACCGTCG ATCATGACGA ACATGCGGTG
CGGCTCGCGG TCGACGTCGA GCCGGGCTAT GCCCAGCGGA TCGGCAAGAT CACGATCGAC
GGCGAGCGGC TGTTCAGCGC CAAGCATCTC GGCCGGATCG CGCGGTTTCG GACCGGCGAC
ATGTACGACG CCGCGCGGAT GGAGGATTTC CGTCGCGCGC TGATCCAGAC CAGTCTGGTC
TCGGCGGTCA CGATCAAGCC GGTGGCGACC GCGGACCCGC AGGTCGTCGA TATCGCGGTG
AAGCTCGAAC CCGCGCCGCC GCGCACCGTC GCCGGCGCGA TCGGCTACGG CACCGGCGAG
GGCTATCGGC TGGAGGCGAG CTGGCAGCAT CGCAACCTGG TCCGGCCCGA AGGCGCCGTC
ACCTTCCGTG GCGTGCTGGG CACCCAGGAA CAGTCGCTGG GCGCGACGCT CCGCCGCAAC
AACTACAAGG CGCGCGATCG GGTCCTCACC GGCCAGGTCA TCCTCAGCCA TCTCGACCAG
AACGCCTATG AAGCGCGCAG CCTCACCATC GGCGCCGGGC TGGAGCGGCA GACCAACATC
ATCTGGCAGA AGAAATGGAC CTGGTCCTAC GGCGTCGAGC TGGTGGCTTC GAAGGAACAG
GACACGGTCA AGGCGACCGG CGCGCCGCGC AGCCGGCAAT ATCTGATCGG CGCGCTGCCC
TCCAGCCTGT CCTATGACGG GTCGGACGAT CTGCTCAACC CGACCCGCGG CTATCGCCTC
GCCGCGCGCG TCTCCCCGGA GCTGTCGCTG CAAGGCAGCG CCTTCGGTTA TGTGAAGGCG
CAGGTCGACG GCAGTTCCTA CCTGCCGGTC GGCGGGAGGA CGGTGATCGC CGGGCGGGTC
CGTTTCGGTT CGATTATCGG CGCGTCGGCC GAACGGATCG CGCCGACCCG GCGCTTCTAT
GCGGGCGGCG GTGGATCGGT GCGCGGCTAT GGCTATCAGA AGATCGGCCC GGTCGACATC
AACGGCGATC CCGCCGGGGG CCGCAGCCTC GCCGAATTCT CGATCGAGGC GCGCGTCCGC
TTCGGCGATT TCGGCGTGGT GCCGTTCCTC GACGGCGGAA ATCTCTATTC GGCACGGCTG
CCGACCTTCA ACAACCTGCG CTACGGCGCC GGTATCGGCG TCCGCTACTA TACCAGCTTC
GGACCGATCC GCGTCGATGT CGGCACACCG CTGAATCGCC GGCCCGGCGA TTCGCGGATC
GCCGTTTACG TCTCGCTCGG ACAGGCCTTC TGA
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| Protein sequence | MRNARRPTCA RSIVLGAMLC VSAAAQAQPA PPPAASDDPA ELPELDPSTE MAPLPGMEVD
WPEAADTAGE QPADAGAATG ATAESTLSDA QADRRYGVDI TGLSGKDGVA PETESAIRSR
FRQLSALEEG KGAGNTAQID RRARQDEALL NELLRAAGYY DARVSTRIED EKTGRLGVSL
VVRPGELYTL SGIDFGGIDA AGDVAAQLRR AFGLEAGQPA DSDRIEAGLG ALKAELGHEG
FVFAKIGEPK LTVDHDEHAV RLAVDVEPGY AQRIGKITID GERLFSAKHL GRIARFRTGD
MYDAARMEDF RRALIQTSLV SAVTIKPVAT ADPQVVDIAV KLEPAPPRTV AGAIGYGTGE
GYRLEASWQH RNLVRPEGAV TFRGVLGTQE QSLGATLRRN NYKARDRVLT GQVILSHLDQ
NAYEARSLTI GAGLERQTNI IWQKKWTWSY GVELVASKEQ DTVKATGAPR SRQYLIGALP
SSLSYDGSDD LLNPTRGYRL AARVSPELSL QGSAFGYVKA QVDGSSYLPV GGRTVIAGRV
RFGSIIGASA ERIAPTRRFY AGGGGSVRGY GYQKIGPVDI NGDPAGGRSL AEFSIEARVR
FGDFGVVPFL DGGNLYSARL PTFNNLRYGA GIGVRYYTSF GPIRVDVGTP LNRRPGDSRI
AVYVSLGQAF
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