Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4824 |
Symbol | |
ID | 5199831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 5313906 |
End bp | 5314556 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640584381 |
Product | putative phage repressor |
Protein accession | YP_001265299 |
Protein GI | 148557717 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.852274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.393285 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACG ACGTCCGCAG CGCTCTCGAT GCCCTGATCC GGGAGCGGGG AGAGGATTAC AGCGCGATCT CGCGGCTGCT GGGGCGCAAC CCCGCCTATA TCCAGCAATT CATCAAGCGC GGCTCCCCAC GCAAGCTGTC GGAGGAGGAC CGGCTTCGGC TGGCGGCCTA TTTCCGGGTT CCCGAAACCC GGCTTGGTGG TCGGGCAGAT GGAGGGCCGG CGGGGGATAT GGCGCTCGCC GCCGCACTGG TGACGGTGCC CAGGATCGCG ATCGGCGCCT CGGCCGGGCC GGGCGGCATC GCGGAGATCG AGGAGCGCGA TCGCCCGATC GCCTTCGACG ACGGGCTGCT ACGCGATCTT GGCGCGGGGC GGCGGGCGGC GCTGTCGATC ATCCGGGTCG CCGGGGAATC GATGGAGCCG ACCCTGCACG ACGGCGACGA CATATTGGTC GATCGCGACG CCAGCGAAAT CCGTCCGGGC GGTATCTATG TGCTGCGGCT CGACGACCTG CTGATGGTCA AGCGGCTGCT CCGCGACGAC CGTGGCCTCG TCGTCCACAG CGACAATCCG GCCCATCCGG AGATCGCCGG CTTCGATCCG GCGACGTTGC AGGTGATCGG CCGCGTGTTG TGGTGCGGCC GGAAGCTGTA G
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Protein sequence | MADDVRSALD ALIRERGEDY SAISRLLGRN PAYIQQFIKR GSPRKLSEED RLRLAAYFRV PETRLGGRAD GGPAGDMALA AALVTVPRIA IGASAGPGGI AEIEERDRPI AFDDGLLRDL GAGRRAALSI IRVAGESMEP TLHDGDDILV DRDASEIRPG GIYVLRLDDL LMVKRLLRDD RGLVVHSDNP AHPEIAGFDP ATLQVIGRVL WCGRKL
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