Gene Swit_4824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4824 
Symbol 
ID5199831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5313906 
End bp5314556 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content69% 
IMG OID640584381 
Productputative phage repressor 
Protein accessionYP_001265299 
Protein GI148557717 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.852274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.393285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACG ACGTCCGCAG CGCTCTCGAT GCCCTGATCC GGGAGCGGGG AGAGGATTAC 
AGCGCGATCT CGCGGCTGCT GGGGCGCAAC CCCGCCTATA TCCAGCAATT CATCAAGCGC
GGCTCCCCAC GCAAGCTGTC GGAGGAGGAC CGGCTTCGGC TGGCGGCCTA TTTCCGGGTT
CCCGAAACCC GGCTTGGTGG TCGGGCAGAT GGAGGGCCGG CGGGGGATAT GGCGCTCGCC
GCCGCACTGG TGACGGTGCC CAGGATCGCG ATCGGCGCCT CGGCCGGGCC GGGCGGCATC
GCGGAGATCG AGGAGCGCGA TCGCCCGATC GCCTTCGACG ACGGGCTGCT ACGCGATCTT
GGCGCGGGGC GGCGGGCGGC GCTGTCGATC ATCCGGGTCG CCGGGGAATC GATGGAGCCG
ACCCTGCACG ACGGCGACGA CATATTGGTC GATCGCGACG CCAGCGAAAT CCGTCCGGGC
GGTATCTATG TGCTGCGGCT CGACGACCTG CTGATGGTCA AGCGGCTGCT CCGCGACGAC
CGTGGCCTCG TCGTCCACAG CGACAATCCG GCCCATCCGG AGATCGCCGG CTTCGATCCG
GCGACGTTGC AGGTGATCGG CCGCGTGTTG TGGTGCGGCC GGAAGCTGTA G
 
Protein sequence
MADDVRSALD ALIRERGEDY SAISRLLGRN PAYIQQFIKR GSPRKLSEED RLRLAAYFRV 
PETRLGGRAD GGPAGDMALA AALVTVPRIA IGASAGPGGI AEIEERDRPI AFDDGLLRDL
GAGRRAALSI IRVAGESMEP TLHDGDDILV DRDASEIRPG GIYVLRLDDL LMVKRLLRDD
RGLVVHSDNP AHPEIAGFDP ATLQVIGRVL WCGRKL