| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4806 |
|---|
| Symbol | |
|---|
| ID | 5199354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 5292581 |
|---|
| End bp | 5294086 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640584363 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_001265281 |
|---|
| Protein GI | 148557699 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.700261 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTCG CCAACGACTA TAGCCTGTTG TCCGACGCCG CCCGTTCCTT CGCGAGCGGC
AGGCGGGAGC TGTTCATCGA CGGGGAATGG CGGGCGCCGC GTGCCGGCCG CTACCGTCCG
GTGATCGATC CCAGCCATGG CGGGGCGATC GCCGAGGTGG CCGAGGCCGA TGCCGCCGAC
GTCGACGACG CGGTCCGCGC CGCGCGGCGC GCCTTCGAAA CCGGCCCCTG GCCGGCGATG
CGCCCGCACG AGCGCGAGGC GCTGATGTTG CGGCTCGCCG AGCTGATCGC CGCCGAGGCC
GCGACCATCG CGCAGATCGA GACGGTCAAC AGCGGCAAGC TGATCCAGAA CACGCGCCTG
TTCGACGCCG ACTTCTCGGT CCACACGCTG CGCTACATGG CGGGCTGGGC GACCAAGCTC
CACGGCAAGA CCATGGAACT GTCGGTGCCC TATCTGCCGG GCGCGCGCTT CTCGGGCTTC
ACCCGGCTCC AGCCGCTCGG CGTCGTCGCG GGCATCGCGC CCTGGAACGT GCCGCTGTGC
GAGGCGGTGT GGAAGCTGGC GCCGGTGCTC GCCACCGGCT GCACCATCGT CCTCAAGCCC
GCCGAGCAGA CCCCGCTCAC CACGCTGCGC CTCGCCGAGC TGTGCGCCGA GGCGGGTATC
CCGGCCGGTG TCGTCAACGT CGTCACCGGC AGCGGCGCGG TCGCCGGCGC GGCGCTGGTC
GAGCATCCGG GAGTCGACAA GATCAACTTC ACCGGATCGA CCGAGGTCGG CCGGATCATC
GCCGGATCGG CCGGCCCGCG CCTCAAGAAG TATAATCTCG AACTGGGCGG CAAGTCGCCG
GTGGTGATCG CCGCCGACGC CGACCTGGAT GCGGCGATCC CCGGCGCGGC CTGGGCGATC
CTCGGCAATC ACGGCCAGAA TTGCTGCGCT GGATCGCGCC TCTACGTCCA TCGCTCGATC
TTCGACACGG TGGTCGAGGG CGTCGCGGAG ATCGCCGCCA GCCTGAAGAT CGGTCCCGGC
CTCGACCCGT CGACCGGCCT CGGCCCGATG GTCAGCCATG CGCATCGCGA CCGGGTGCTC
GGCTATGTCG AGCGCGGCGT GGCGGATGGC GGATCGCTGT TCTTCGGCGG CGAGGCGATC
GACGATCCGG GCGCCTATCT GCGCCCCGCG ATCATCGTCG GCGCCAGGCC GACCGACGCG
GTGGTGCAGG AGGAGATATT CGGCCCCGTC CTCGTCGCCA CGCCGTTCGA CGACATGGAC
GACGTGATGC CGCAGGTGAA CGGCACCAGC TTCGGGCTGG GCGCCAGCAT CTGGTCGCGA
GACTTCGACC TGATCGAGGA TTTCGTCGAT CGCGTGCAGG CGGGCACCGT CTGGATCAAC
AACCACAACA CGCTCGATCT GTCGCTGCCC TTCGGCGGCT GGAAGCAGTC GGGGGTCGGT
CATGAGCTGG GCGAGGAGGG GTTGATGTCC CACCTCGCGA TCAAGGCCGG CGTGGTCCGG
CGCTGA
|
|---|
| Protein sequence | MTLANDYSLL SDAARSFASG RRELFIDGEW RAPRAGRYRP VIDPSHGGAI AEVAEADAAD
VDDAVRAARR AFETGPWPAM RPHEREALML RLAELIAAEA ATIAQIETVN SGKLIQNTRL
FDADFSVHTL RYMAGWATKL HGKTMELSVP YLPGARFSGF TRLQPLGVVA GIAPWNVPLC
EAVWKLAPVL ATGCTIVLKP AEQTPLTTLR LAELCAEAGI PAGVVNVVTG SGAVAGAALV
EHPGVDKINF TGSTEVGRII AGSAGPRLKK YNLELGGKSP VVIAADADLD AAIPGAAWAI
LGNHGQNCCA GSRLYVHRSI FDTVVEGVAE IAASLKIGPG LDPSTGLGPM VSHAHRDRVL
GYVERGVADG GSLFFGGEAI DDPGAYLRPA IIVGARPTDA VVQEEIFGPV LVATPFDDMD
DVMPQVNGTS FGLGASIWSR DFDLIEDFVD RVQAGTVWIN NHNTLDLSLP FGGWKQSGVG
HELGEEGLMS HLAIKAGVVR R
|
|---|
| |