| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4804 |
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| Symbol | |
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| ID | 5199352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5289030 |
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| End bp | 5291351 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640584361 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001265279 |
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| Protein GI | 148557697 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.176822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.517997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGAT CCTTTGTTTC GACCTCCTCC ACCATCGCCC TGACCGTCGC CGCGCTGCTG
GCGGGCGCGC CGGCCGCCGC GCAGGAAGCG ACGAGCGCCC CCGCCGCGGC CGAAGCCGAC
AATGGCGGCC TGGCCGAGAT CGTCGTCACC GCGCAGAAGC GCGAGCAGAA CCTCCAGAAG
GTCGGCATCT CCGTCACCGC CGTCTCGGGC GACCAGATCC TCGAGCGCGG CATCTCCAAC
AGCATCGACC TGATCACCCG CACGCCGAGC GTCGACAATT ATTCGCCCTA CGGCCCGGGT
TCGAGCGCCA ACATCGTCAT CCGCGGCATC GGCCTCAACG ACTTCGGCGA GGGCCATGAG
GCGCCGGTCA CCGTCTATGT CGACGAATTC TACGTCGTGA ACGTGCCGGC GGTCGACTTC
GCGCTGTTCG ACCTCGACCG CGCCGAGATC CTGCGCGGGC CGCAGGGCAC GCTGTTCGGC
CGCAACTCGA CCGGCGGCCT CGTCCACTAT GTCACCAAGA AGCCGAGCCA GGAGGCCGGC
GGCTTCGTCA AGGGCAGCTA TGCGCGCTTC AACGAGTTGA AGCTCGAAGG CGGCGTCACC
GCGCCGCTGA CCGACACGCT GTCGGCGCGC CTGTCCTTCC TGTCGCACCA CAGCGACGGC
TACATCAAGA ACCTCAACCC GCAATTCGCC AAGGACAAGG GCGGCCAGGC CGGCACCGAC
GCGGTCCGCC TCCAGCTCCG CTACGACGAC GGCGACTGGG ACGTGCTGCT GAAGGGCGAA
TATGGCCGGA CCGACAAGGT CCACACCTAT TATGAGCAGA CCCCCAGCCT GCGCGATCCG
GTGACGGGGC TCGGCTCGGC CGATCCGACC GGGGTCGACG ACGCCGGCTA TAACGAGGCC
AATTTCGGCG CGGGCAAGCG CAACGTCGCC TATACCAGCA ACCCGCAGCG GCTGAAGTCG
AAGGGCTCCA CCGCGCTGCT CCGCGCCGAG CGCGACTTCG GCGACGTCAG CTTCACCTCG
CTGACCGGCT ACATGCACTT CACCCGCAAC CTCGAAGAGG ATTGCGACGC CAGCCCGAAC
ACGATCTGCG TCGCCACCTT CCCGTATAAG AGCGACACCG CGACCCAGGA ATTCCGCGCC
TTCGGCAAGG GCGACGGCTT CAACTGGACG GCGGGCGTCT ACGGCCTCTA TTCGAAGGCG
CGCAACAATC CCAACGCGAC CTTCAACGTG CCGGTGTCGG GCGACACCGC GGTCGATCCG
GTGACGGGCC TGTACAACGG TGCCTTCTTC CCGATCAACC TGGCGGCCAA CTGGAAGATG
CGGACGACCT CGGTCGCGGC CTTCGCGCAG GGCGAGGTGG AACTCGCCGA TCGGCTGACC
TTCACCCTCG GCGGCCGCAT CACCCGCGAC AGCAAGAAGT TCGACGAGCG CGACAACGCC
TCGCTGCGGA GCTGCCCGGG CTTCCCGATC CCGACCAACT GCTTCCTGCC GCCGAACGGG
CCGGGCATCG CCAACCCCTA TCGGGACACC TACAAGAAGA CGCTGATCTC GGGTAAGGCC
GCGCTTGATT TCCAGGTGAA CGCCGACCTG CTGCTGTTCG CCAGCGTGTC GCGCGGCACC
AAGGCCGGCG GCTTCAACAA CGGCTTCTAT CCGGGCGGCG TCAGCACCGC GCAGATCCCC
TATCGCGACG AGAATGTCAT CGCCTATGAG ATCGGCGAGA AGGCGACGCT GTTCGACCGC
AAGCTGCGCT TCAACACCTC CTTCTTCTAC TATGACTATA ACCGCTACCA GACCTTCAAC
TTCGAGGGGA TCGGCGGCCT GCTGACCAAC CAGAGCGCCA ATGCCTATGG CGCCGAGGTC
GAGATCCAGG CGGCGCCGGT CGACCATCTG GAGCTGCGCT TCGGCGGTTC GTGGCTGGAG
ACGAAGATCA AGGACGTCCG CAACGGCGTG CCCGGCGGCG GGGTCTATGT CGCCGACCGC
GAGATGTCGA ACGCGCCGAA ATGGACCGCC AACGGCGCGA TCGCCTACAC CGTGCCGCTC
GCCAACGACC GCTCGCTGGT GTTCAACTGG GACTGGAACT ATCGCTCCAG CCGCTACTCG
AACAACTTCA ACGATCCGTC GGTGAAGATG CCGGGCTATT TCAAGCATAA TGCCGACATC
TCGTTCAACG TGAACGAGAA CTGGCAGCTC CAGGCCTTCG TTCGCAACAT CGGCAACAAG
CTGGCGATCA CCAAGGCGTT CCAGTTCAAC GACCTCGGCT ATGTCCAGTA TATCTATTCC
GAGCCGCGGG TGTTCGGCGC GAGCGCGCTG TACCGGTTCT GA
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| Protein sequence | MTRSFVSTSS TIALTVAALL AGAPAAAQEA TSAPAAAEAD NGGLAEIVVT AQKREQNLQK
VGISVTAVSG DQILERGISN SIDLITRTPS VDNYSPYGPG SSANIVIRGI GLNDFGEGHE
APVTVYVDEF YVVNVPAVDF ALFDLDRAEI LRGPQGTLFG RNSTGGLVHY VTKKPSQEAG
GFVKGSYARF NELKLEGGVT APLTDTLSAR LSFLSHHSDG YIKNLNPQFA KDKGGQAGTD
AVRLQLRYDD GDWDVLLKGE YGRTDKVHTY YEQTPSLRDP VTGLGSADPT GVDDAGYNEA
NFGAGKRNVA YTSNPQRLKS KGSTALLRAE RDFGDVSFTS LTGYMHFTRN LEEDCDASPN
TICVATFPYK SDTATQEFRA FGKGDGFNWT AGVYGLYSKA RNNPNATFNV PVSGDTAVDP
VTGLYNGAFF PINLAANWKM RTTSVAAFAQ GEVELADRLT FTLGGRITRD SKKFDERDNA
SLRSCPGFPI PTNCFLPPNG PGIANPYRDT YKKTLISGKA ALDFQVNADL LLFASVSRGT
KAGGFNNGFY PGGVSTAQIP YRDENVIAYE IGEKATLFDR KLRFNTSFFY YDYNRYQTFN
FEGIGGLLTN QSANAYGAEV EIQAAPVDHL ELRFGGSWLE TKIKDVRNGV PGGGVYVADR
EMSNAPKWTA NGAIAYTVPL ANDRSLVFNW DWNYRSSRYS NNFNDPSVKM PGYFKHNADI
SFNVNENWQL QAFVRNIGNK LAITKAFQFN DLGYVQYIYS EPRVFGASAL YRF
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