| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4803 |
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| Symbol | |
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| ID | 5198889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 5287829 |
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| End bp | 5288851 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640584360 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001265278 |
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| Protein GI | 148557696 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.587484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAGG AACGCAAGGT CTGGACCCCG GGCGATCTTC CGCTCGACCG CTGGAACCGC
TTCGCCAGCA CCGAGATCGA CGCGGTCCAC CAGCATATGG TGCACGCCTT CTGCCCCCAC
GACCTGTCGA CCGAGGGCGG CGTGCCGCCG ATCGCCTTTC GCCACAACCA GGCGACGCTG
CGGTCGAGCA CCTTCAACGC GACCGATTAC GGCCTGCCCT ATGGCCGGGT GGCGGTGTCG
ATCCCGCCCG CCGAGCATTG CTTCCTCGTC CAGTTCGTCC TCAGCGGCCA GGCGCAGTTC
GGACATCAGG GACGGACCTT CGTGCTGCGG CCCGGCCAGA TGTCGGTGCT GAGCCCGCAT
GAGCCGATCC GCCAGATCAC CGACGCCGGC TGCCGCCATT TCACCGTCAA GCTCGATCGC
TCGCACCTCG AAAAGCTGCT CAACGAGGAT TTCGGCCACC GCACCCGGCC GCTGATCTTC
GCGCCCGATC CGATTGCGAT CGACGGGCTC GCCGGCTCCT TCGCGCAGTT CGTGCGCGCG
GTGGTCGAGG ACATGGACGA CGGCGATTCC GGCTTCGTCC ATCCGCGCGC GATCGGCACG
ACCGAGGAGA TGCTGGGCCG GCTGCTGCTC ACCTCGGTGC CGCACAATTA TTCGCACGAC
TATGCGATGG AGCCGCGCAA CGTCGCGACG CCCTATTATG TGCGCCGCGC CGAGGAGCTG
ATCCGCGAGC GCTATCATGA GCAGCTCACC CTGTCCGACC TGATCACCGC CTCGGGCGTC
AGCGGCCGTT CGCTGCATTT CGGCTTCCGG CGGTTCCGCG ACGACAGCCC GATGGGCTAT
CTCAAGCGCT ACCGGCTCGA ACGGGCGCGG GCGATGCTCA GGGAGGTGCA GGGCAGCGGC
GTGACCGTGA CCGAGGTCGC GCTCGCCAAC GGCTTCCTCC ACCCCAGCAA ATTCTCCCAG
GATTATGCCC GCCGCTTCGG CGAGCTGCCC TCCTTCACCC TGAAGAAGGC CCATAGCGCC
TGA
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| Protein sequence | MIEERKVWTP GDLPLDRWNR FASTEIDAVH QHMVHAFCPH DLSTEGGVPP IAFRHNQATL
RSSTFNATDY GLPYGRVAVS IPPAEHCFLV QFVLSGQAQF GHQGRTFVLR PGQMSVLSPH
EPIRQITDAG CRHFTVKLDR SHLEKLLNED FGHRTRPLIF APDPIAIDGL AGSFAQFVRA
VVEDMDDGDS GFVHPRAIGT TEEMLGRLLL TSVPHNYSHD YAMEPRNVAT PYYVRRAEEL
IRERYHEQLT LSDLITASGV SGRSLHFGFR RFRDDSPMGY LKRYRLERAR AMLREVQGSG
VTVTEVALAN GFLHPSKFSQ DYARRFGELP SFTLKKAHSA
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