Gene Swit_4794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4794 
Symbol 
ID5197237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp5280845 
End bp5281297 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content70% 
IMG OID640584351 
Producthypothetical protein 
Protein accessionYP_001265269 
Protein GI148557687 
COG category[S] Function unknown 
COG ID[COG4731] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0246667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.215514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCTG CGATCCTGAT GACGGCGGCC GCGCTGCTGG CCGTCGCGGT GCCCGCGGCC 
GCCAGCCCGG CCCCCGCGAA CGGCTGCGCC GCCGCCGCCC GGCCAACGGT CGAGGGGCTG
TGGATGAACC CGCACGGCAC CGTGGCGGTC CGGACCGGCG ATTGCCGGGG CCGGCTGTGC
GGCTGGGTGG TGTGGGCGAG CCCGCAAGCC CTCCAGGACG CGAAGGACGG CGGCGTCGAC
CATCTCGTCG GGACCGAACT ACTCGAGGAC TACAGCGCCG ACGGCGCCGA TCGCTGGTCC
GGATCGGTCT ACGTCCCCGA CATGGGACAC AGCTTCTCGT CGACCATCAC CCTTTCCGCC
CCCGGCGAAC TCCAGATCCG GGGCTGCCTG ATCGGCGGCA TCTTCTGCAA GTCGCAGACC
TGGCAGCGCA TCGAAAAGGT TCCCAATGCA TAA
 
Protein sequence
MKPAILMTAA ALLAVAVPAA ASPAPANGCA AAARPTVEGL WMNPHGTVAV RTGDCRGRLC 
GWVVWASPQA LQDAKDGGVD HLVGTELLED YSADGADRWS GSVYVPDMGH SFSSTITLSA
PGELQIRGCL IGGIFCKSQT WQRIEKVPNA